Literature DB >> 21051637

Mutational robustness of ribosomal protein genes.

Peter A Lind1, Otto G Berg, Dan I Andersson.   

Abstract

The distribution of fitness effects (DFE) of mutations is of fundamental importance for understanding evolutionary dynamics and complex diseases and for conserving threatened species. DFEs estimated from DNA sequences have rarely been subject to direct experimental tests. We used a bacterial system in which the fitness effects of a large number of defined single mutations in two ribosomal proteins were measured with high sensitivity. The obtained DFE appears to be unimodal, where most mutations (120 out of 126) are weakly deleterious and the remaining ones are potentially neutral. The DFEs for synonymous and nonsynonymous substitutions are similar, suggesting that in some genes, strong fitness constraints are present at the level of the messenger RNA.

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Year:  2010        PMID: 21051637     DOI: 10.1126/science.1194617

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  60 in total

Review 1.  Evolutionary optimization of speed and accuracy of decoding on the ribosome.

Authors:  Ingo Wohlgemuth; Corinna Pohl; Joerg Mittelstaet; Andrey L Konevega; Marina V Rodnina
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

2.  Fitness analyses of all possible point mutations for regions of genes in yeast.

Authors:  Ryan Hietpas; Benjamin Roscoe; Li Jiang; Daniel N A Bolon
Journal:  Nat Protoc       Date:  2012-06-21       Impact factor: 13.491

3.  Breaking evolutionary constraint with a tradeoff ratchet.

Authors:  Marjon G J de Vos; Alexandre Dawid; Vanda Sunderlikova; Sander J Tans
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-13       Impact factor: 11.205

4.  Relaxed natural selection alone does not permit transposable element expansion within 4,000 generations in Escherichia coli.

Authors:  Gordon R Plague; Kevin M Dougherty; Krystal S Boodram; Samantha E Boustani; Huansheng Cao; Sarah R Manning; Camille C McNally
Journal:  Genetica       Date:  2011-07-13       Impact factor: 1.082

5.  Capturing the mutational landscape of the beta-lactamase TEM-1.

Authors:  Hervé Jacquier; André Birgy; Hervé Le Nagard; Yves Mechulam; Emmanuelle Schmitt; Jérémy Glodt; Beatrice Bercot; Emmanuelle Petit; Julie Poulain; Guilène Barnaud; Pierre-Alexis Gros; Olivier Tenaillon
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-22       Impact factor: 11.205

6.  Neutral evolution of robustness in Drosophila microRNA precursors.

Authors:  Nicholas Price; Reed A Cartwright; Niv Sabath; Dan Graur; Ricardo B R Azevedo
Journal:  Mol Biol Evol       Date:  2011-01-31       Impact factor: 16.240

7.  Experimental illumination of a fitness landscape.

Authors:  Ryan T Hietpas; Jeffrey D Jensen; Daniel N A Bolon
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-04       Impact factor: 11.205

Review 8.  Statistics and truth in phylogenomics.

Authors:  Sudhir Kumar; Alan J Filipski; Fabia U Battistuzzi; Sergei L Kosakovsky Pond; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2011-08-26       Impact factor: 16.240

Review 9.  Rapid bursts and slow declines: on the possible evolutionary trajectories of enzymes.

Authors:  Matilda S Newton; Vickery L Arcus; Wayne M Patrick
Journal:  J R Soc Interface       Date:  2015-06-06       Impact factor: 4.118

Review 10.  Culture history and population heterogeneity as determinants of bacterial adaptation: the adaptomics of a single environmental transition.

Authors:  Ben Ryall; Gustavo Eydallin; Thomas Ferenci
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

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