Literature DB >> 21045547

Nucleic acid chaperone properties of ORF1p from the non-LTR retrotransposon, LINE-1.

Sandra L Martin1.   

Abstract

Long interspersed element-1 (LINE-1, or L1) is a non-long terminal repeat (LTR) retrotransposon that has amplified to hundreds of thousands of copies in mammalian evolution. A small number of the individual copies of L1 are active retrotransposons which are presently replicating in most species, including humans and mice. L1 retrotransposition begins with transcription of an active element and ends with a newly inserted cDNA copy, a process which requires the two element-encoded proteins to act in cis on the L1 RNA. The ORF1 protein (ORF1p) is a high-affinity, non-sequence-specific RNA binding protein with nucleic acid chaperone activity, whereas the ORF2 protein (ORF2p) supplies the enzymatic activities for cDNA synthesis. This article reviews the nucleic acid chaperone properties of ORF1p in the context of L1 retrotransposition.

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Year:  2010        PMID: 21045547      PMCID: PMC3073329          DOI: 10.4161/rna.7.6.13766

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  61 in total

1.  Cis-preferential LINE-1 reverse transcriptase activity in ribonucleoprotein particles.

Authors:  Deanna A Kulpa; John V Moran
Journal:  Nat Struct Mol Biol       Date:  2006-06-18       Impact factor: 15.369

2.  Ribonucleoprotein particles with LINE-1 RNA in mouse embryonal carcinoma cells.

Authors:  S L Martin
Journal:  Mol Cell Biol       Date:  1991-09       Impact factor: 4.272

3.  Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition.

Authors:  Q Feng; J V Moran; H H Kazazian; J D Boeke
Journal:  Cell       Date:  1996-11-29       Impact factor: 41.582

4.  Human L1 retrotransposition: cis preference versus trans complementation.

Authors:  W Wei; N Gilbert; S L Ooi; J F Lawler; E M Ostertag; H H Kazazian; J D Boeke; J V Moran
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

5.  C-terminal domain modulates the nucleic acid chaperone activity of human T-cell leukemia virus type 1 nucleocapsid protein via an electrostatic mechanism.

Authors:  Dominic F Qualley; Kristen M Stewart-Maynard; Fei Wang; Mithun Mitra; Robert J Gorelick; Ioulia Rouzina; Mark C Williams; Karin Musier-Forsyth
Journal:  J Biol Chem       Date:  2009-11-03       Impact factor: 5.157

6.  Human L1 element target-primed reverse transcription in vitro.

Authors:  Gregory J Cost; Qinghua Feng; Alain Jacquier; Jef D Boeke
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

7.  Deletion analysis defines distinct functional domains for protein-protein and nucleic acid interactions in the ORF1 protein of mouse LINE-1.

Authors:  S L Martin; J Li; J A Weisz
Journal:  J Mol Biol       Date:  2000-11-17       Impact factor: 5.469

8.  LINE-mediated retrotransposition of marked Alu sequences.

Authors:  Marie Dewannieux; Cécile Esnault; Thierry Heidmann
Journal:  Nat Genet       Date:  2003-08-03       Impact factor: 38.330

9.  Mechanistic insights into the kinetics of HIV-1 nucleocapsid protein-facilitated tRNA annealing to the primer binding site.

Authors:  Michele R S Hargittai; Robert J Gorelick; Ioulia Rouzina; Karin Musier-Forsyth
Journal:  J Mol Biol       Date:  2004-04-02       Impact factor: 5.469

10.  Nucleic acid binding and chaperone properties of HIV-1 Gag and nucleocapsid proteins.

Authors:  Margareta Cruceanu; Maria A Urbaneja; Catherine V Hixson; Donald G Johnson; Siddhartha A Datta; Matthew J Fivash; Andrew G Stephen; Robert J Fisher; Robert J Gorelick; Jose R Casas-Finet; Alan Rein; Ioulia Rouzina; Mark C Williams
Journal:  Nucleic Acids Res       Date:  2006-01-30       Impact factor: 16.971

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  46 in total

Review 1.  Active human retrotransposons: variation and disease.

Authors:  Dustin C Hancks; Haig H Kazazian
Journal:  Curr Opin Genet Dev       Date:  2012-03-08       Impact factor: 5.578

2.  Independently derived targeting of 28S rDNA by A- and D-clade R2 retrotransposons: Plasticity of integration mechanism.

Authors:  Blaine K Thompson; Shawn M Christensen
Journal:  Mob Genet Elements       Date:  2011-05

3.  Similarities between long interspersed element-1 (LINE-1) reverse transcriptase and telomerase.

Authors:  Huira C Kopera; John B Moldovan; Tammy A Morrish; Jose Luis Garcia-Perez; John V Moran
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-22       Impact factor: 11.205

4.  Effect of heavy metals on silencing of engineered long interspersed element-1 retrotransposon in nondividing neuroblastoma cell line.

Authors:  Laleh Habibi; Mohammad Ali Shokrgozar; Mahdieh Motamedi; Seyed Mohammad Akrami
Journal:  Iran Biomed J       Date:  2013

5.  Phosphorylation of ORF1p is required for L1 retrotransposition.

Authors:  Pamela R Cook; Charles E Jones; Anthony V Furano
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-23       Impact factor: 11.205

6.  Acquisition of an Archaea-like ribonuclease H domain by plant L1 retrotransposons supports modular evolution.

Authors:  Georgy Smyshlyaev; Franka Voigt; Alexander Blinov; Orsolya Barabas; Olga Novikova
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-25       Impact factor: 11.205

7.  Enrichment of processed pseudogene transcripts in L1-ribonucleoprotein particles.

Authors:  Prabhat K Mandal; Adam D Ewing; Dustin C Hancks; Haig H Kazazian
Journal:  Hum Mol Genet       Date:  2013-05-21       Impact factor: 6.150

8.  Reprogramming of the HepG2 genome by long interspersed nuclear element-1.

Authors:  Pasano Bojang; Ruth A Roberts; Mark J Anderton; Kenneth S Ramos
Journal:  Mol Oncol       Date:  2013-04-17       Impact factor: 6.603

9.  LINE-1 retrotransposons: from 'parasite' sequences to functional elements.

Authors:  Ana Paço; Filomena Adega; Raquel Chaves
Journal:  J Appl Genet       Date:  2014-08-09       Impact factor: 3.240

Review 10.  Post-transcriptional regulation of LINE-1 retrotransposition by AID/APOBEC and ADAR deaminases.

Authors:  Elisa Orecchini; Loredana Frassinelli; Silvia Galardi; Silvia Anna Ciafrè; Alessandro Michienzi
Journal:  Chromosome Res       Date:  2018-02-02       Impact factor: 5.239

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