Literature DB >> 29396793

Post-transcriptional regulation of LINE-1 retrotransposition by AID/APOBEC and ADAR deaminases.

Elisa Orecchini1, Loredana Frassinelli1, Silvia Galardi1, Silvia Anna Ciafrè1, Alessandro Michienzi2.   

Abstract

Long interspersed element-1 (LINE-1 or L1) retrotransposons represent the only functional family of autonomous transposable elements in humans and formed 17% of our genome. Even though most of the human L1 sequences are inactive, a limited number of copies per individual retain the ability to mobilize by a process termed retrotransposition. The ongoing L1 retrotransposition may result in insertional mutagenesis that could lead to negative consequences such as genetic disease and cancer. For this reason, cells have evolved several mechanisms of defense to restrict L1 activity. Among them, a critical role for cellular deaminases [activation-induced deaminase (AID)/apolipoprotein B mRNA-editing catalytic polypeptide-like (APOBEC) and adenosine deaminases that act on RNA (ADAR) enzymes] has emerged. The majority of the AID/APOBEC family of proteins are responsible for the deamination of cytosine to uracil (C-to-U editing) within DNA and RNA targets. The ADARs convert adenosine bases to inosines (A-to-I editing) within double-stranded RNA (dsRNA) targets. This review will discuss the current understanding of the regulation of LINE-1 retrotransposition mediated by these enzymes.

Entities:  

Keywords:  ADAR enzymes; AID/APOBEC proteins; Alu; LINE-1; Retrotransposon

Mesh:

Substances:

Year:  2018        PMID: 29396793     DOI: 10.1007/s10577-018-9572-5

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  196 in total

Review 1.  The generation of antibody diversity through somatic hypermutation and class switch recombination.

Authors:  Ziqiang Li; Caroline J Woo; Maria D Iglesias-Ussel; Diana Ronai; Matthew D Scharff
Journal:  Genes Dev       Date:  2004-01-01       Impact factor: 11.361

2.  Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition.

Authors:  Q Feng; J V Moran; H H Kazazian; J D Boeke
Journal:  Cell       Date:  1996-11-29       Impact factor: 41.582

3.  Human L1 element target-primed reverse transcription in vitro.

Authors:  Gregory J Cost; Qinghua Feng; Alain Jacquier; Jef D Boeke
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

Review 4.  Adenosine deaminases acting on RNA (ADARs) are both antiviral and proviral.

Authors:  Charles E Samuel
Journal:  Virology       Date:  2011-01-05       Impact factor: 3.616

5.  DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes.

Authors:  Satomi Kuramochi-Miyagawa; Toshiaki Watanabe; Kengo Gotoh; Yasushi Totoki; Atsushi Toyoda; Masahito Ikawa; Noriko Asada; Kanako Kojima; Yuka Yamaguchi; Takashi W Ijiri; Kenichiro Hata; En Li; Yoichi Matsuda; Tohru Kimura; Masaru Okabe; Yoshiyuki Sakaki; Hiroyuki Sasaki; Toru Nakano
Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

6.  LINE-mediated retrotransposition of marked Alu sequences.

Authors:  Marie Dewannieux; Cécile Esnault; Thierry Heidmann
Journal:  Nat Genet       Date:  2003-08-03       Impact factor: 38.330

7.  Trex1 prevents cell-intrinsic initiation of autoimmunity.

Authors:  Daniel B Stetson; Joan S Ko; Thierry Heidmann; Ruslan Medzhitov
Journal:  Cell       Date:  2008-08-22       Impact factor: 41.582

8.  Adenosine deaminases that act on RNA induce reproducible changes in abundance and sequence of embryonic miRNAs.

Authors:  Cornelia Vesely; Stefanie Tauber; Fritz J Sedlazeck; Arndt von Haeseler; Michael F Jantsch
Journal:  Genome Res       Date:  2012-02-06       Impact factor: 9.043

Review 9.  The AID/APOBEC family of nucleic acid mutators.

Authors:  Silvestro G Conticello
Journal:  Genome Biol       Date:  2008-06-17       Impact factor: 13.583

10.  APOBEC4 Enhances the Replication of HIV-1.

Authors:  Daniela Marino; Mario Perković; Anika Hain; Ananda A Jaguva Vasudevan; Henning Hofmann; Kay-Martin Hanschmann; Michael D Mühlebach; Gerald G Schumann; Renate König; Klaus Cichutek; Dieter Häussinger; Carsten Münk
Journal:  PLoS One       Date:  2016-06-01       Impact factor: 3.240

View more
  10 in total

1.  ADAR2 mislocalization and widespread RNA editing aberrations in C9orf72-mediated ALS/FTD.

Authors:  Stephen Moore; Eric Alsop; Ileana Lorenzini; Alexander Starr; Benjamin E Rabichow; Emily Mendez; Jennifer L Levy; Camelia Burciu; Rebecca Reiman; Jeannie Chew; Veronique V Belzil; Dennis W Dickson; Janice Robertson; Kim A Staats; Justin K Ichida; Leonard Petrucelli; Kendall Van Keuren-Jensen; Rita Sattler
Journal:  Acta Neuropathol       Date:  2019-04-03       Impact factor: 17.088

2.  Meiotic Cells Counteract Programmed Retrotransposon Activation via RNA-Binding Translational Repressor Assemblies.

Authors:  Raphaelle Laureau; Annie Dyatel; Gizem Dursuk; Samantha Brown; Hannah Adeoye; Jia-Xing Yue; Matteo De Chiara; Anthony Harris; Elçin Ünal; Gianni Liti; Ian R Adams; Luke E Berchowitz
Journal:  Dev Cell       Date:  2020-12-04       Impact factor: 12.270

3.  Editome landscape of CCM-derived endothelial cells.

Authors:  Concetta Scimone; Simona Alibrandi; Luigi Donato; Concetta Alafaci; Antonino Germanò; Sergio L Vinci; Rosalia D'Angelo; Antonina Sidoti
Journal:  RNA Biol       Date:  2022-01       Impact factor: 4.766

4.  APOBEC3B Activity Is Prevalent in Urothelial Carcinoma Cells and Only Slightly Affected by LINE-1 Expression.

Authors:  Ananda Ayyappan Jaguva Vasudevan; Ulrike Kreimer; Wolfgang A Schulz; Aikaterini Krikoni; Gerald G Schumann; Dieter Häussinger; Carsten Münk; Wolfgang Goering
Journal:  Front Microbiol       Date:  2018-09-04       Impact factor: 5.640

Review 5.  Recognize Yourself-Innate Sensing of Non-LTR Retrotransposons.

Authors:  Justine Lagisquet; Kilian Zuber; Thomas Gramberg
Journal:  Viruses       Date:  2021-01-12       Impact factor: 5.048

Review 6.  The Role of APOBECs in Viral Replication.

Authors:  Wendy Kaichun Xu; Hyewon Byun; Jaquelin P Dudley
Journal:  Microorganisms       Date:  2020-11-30

Review 7.  Factors Regulating the Activity of LINE1 Retrotransposons.

Authors:  Maria Sergeevna Protasova; Tatiana Vladimirovna Andreeva; Evgeny Ivanovich Rogaev
Journal:  Genes (Basel)       Date:  2021-09-30       Impact factor: 4.096

8.  Pediatric chordoma associated with tuberous sclerosis complex: A rare case report with a thorough analysis of potential therapeutic molecular targets.

Authors:  Kirill Anoshkin; Denis Zosen; Kristina Karandasheva; Maxim Untesco; Ilya Volodin; Ekaterina Alekseeva; Anna Parfenenkova; Eugenia Snegova; Aleksandr Kim; Marina Dorofeeva; Sergei Kutsev; Vladimir Strelnikov
Journal:  Heliyon       Date:  2022-08-19

9.  An internal deletion of ADAR rescued by MAVS deficiency leads to a minute phenotype.

Authors:  Prajakta Bajad; Florian Ebner; Fabian Amman; Brigitta Szabó; Utkarsh Kapoor; Greeshma Manjali; Alwine Hildebrandt; Michael P Janisiw; Michael F Jantsch
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

10.  The RNA editing enzyme ADAR2 restricts L1 mobility.

Authors:  Loredana Frassinelli; Elisa Orecchini; Sofian Al-Wardat; Marco Tripodi; Carmine Mancone; Margherita Doria; Silvia Galardi; Silvia Anna Ciafrè; Alessandro Michienzi
Journal:  RNA Biol       Date:  2021-07-05       Impact factor: 4.652

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.