Literature DB >> 21041675

Structural basis for the one-pot formation of the diarylheptanoid scaffold by curcuminoid synthase from Oryza sativa.

Hiroyuki Morita1, Kiyofumi Wanibuchi, Hirohiko Nii, Ryohei Kato, Shigetoshi Sugio, Ikuro Abe.   

Abstract

Curcuminoid synthase (CUS) from Oryza sativa is a plant-specific type III polyketide synthase (PKS) that catalyzes the remarkable one-pot formation of the C(6)-C(7)-C(6) diarylheptanoid scaffold of bisdemethoxycurcumin, by the condensation of two molecules of 4-coumaroyl-CoA and one molecule of malonyl-CoA. The crystal structure of O. sativa CUS was solved at 2.5-Å resolution, which revealed a unique, downward expanding active-site architecture, previously unidentified in the known type III PKSs. The large active-site cavity is long enough to accommodate the two C(6)-C(3) coumaroyl units and one malonyl unit. Furthermore, the crystal structure indicated the presence of a putative nucleophilic water molecule, which forms hydrogen bond networks with Ser351-Asn142-H(2)O-Tyr207-Glu202, neighboring the catalytic Cys174 at the active-site center. These observations suggest that CUS employs unique catalytic machinery for the one-pot formation of the C(6)-C(7)-C(6) scaffold. Thus, CUS utilizes the nucleophilic water to terminate the initial polyketide chain elongation at the diketide stage. Thioester bond cleavage of the enzyme-bound intermediate generates 4-coumaroyldiketide acid, which is then kept within the downward expanding pocket for subsequent decarboxylative condensation with the second 4-coumaroyl-CoA starter, to produce bisdemethoxycurcumin. The structure-based site-directed mutants, M265L and G274F, altered the substrate and product specificities to accept 4-hydroxyphenylpropionyl-CoA as the starter to produce tetrahydrobisdemethoxycurcumin. These findings not only provide a structural basis for the catalytic machinery of CUS but also suggest further strategies toward expanding the biosynthetic repertoire of the type III PKS enzymes.

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Year:  2010        PMID: 21041675      PMCID: PMC2993369          DOI: 10.1073/pnas.1011499107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  19 in total

1.  Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis.

Authors:  J L Ferrer; J M Jez; M E Bowman; R A Dixon; J P Noel
Journal:  Nat Struct Biol       Date:  1999-08

Review 2.  Multiple biological activities of curcumin: a short review.

Authors:  Radha K Maheshwari; Anoop K Singh; Jaya Gaddipati; Rikhab C Srimal
Journal:  Life Sci       Date:  2006-01-18       Impact factor: 5.037

3.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

Review 4.  Curcumin: the story so far.

Authors:  R A Sharma; A J Gescher; W P Steward
Journal:  Eur J Cancer       Date:  2005-09       Impact factor: 9.162

5.  Dali: a network tool for protein structure comparison.

Authors:  L Holm; C Sander
Journal:  Trends Biochem Sci       Date:  1995-11       Impact factor: 13.807

Review 6.  Chemopreventive and therapeutic effects of curcumin.

Authors:  Annelyse Duvoix; Romain Blasius; Sylvie Delhalle; Michaël Schnekenburger; Franck Morceau; Estelle Henry; Mario Dicato; Marc Diederich
Journal:  Cancer Lett       Date:  2004-11-11       Impact factor: 8.679

7.  Distinct structural elements dictate the specificity of the type III pentaketide synthase from Neurospora crassa.

Authors:  Sheryl B Rubin-Pitel; Houjin Zhang; Trang Vu; Joseph S Brunzelle; Huimin Zhao; Satish K Nair
Journal:  Chem Biol       Date:  2008-10-20

8.  In vitro synthesis of curcuminoids by type III polyketide synthase from Oryza sativa.

Authors:  Yohei Katsuyama; Miku Matsuzawa; Nobutaka Funa; Sueharu Horinouchi
Journal:  J Biol Chem       Date:  2007-10-11       Impact factor: 5.157

9.  Curcuminoid biosynthesis by two type III polyketide synthases in the herb Curcuma longa.

Authors:  Yohei Katsuyama; Tomoko Kita; Nobutaka Funa; Sueharu Horinouchi
Journal:  J Biol Chem       Date:  2009-03-03       Impact factor: 5.157

10.  Biosynthesis of Dictyostelium discoideum differentiation-inducing factor by a hybrid type I fatty acid-type III polyketide synthase.

Authors:  Michael B Austin; Tamao Saito; Marianne E Bowman; Stephen Haydock; Atsushi Kato; Bradley S Moore; Robert R Kay; Joseph P Noel
Journal:  Nat Chem Biol       Date:  2006-08-13       Impact factor: 15.040

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  15 in total

1.  Protein preparation, crystallization and preliminary X-ray analysis of Polygonum cuspidatum bifunctional chalcone synthase/benzalacetone synthase.

Authors:  Heshu Lu; Mingfeng Yang; Chunmei Liu; Ping Lu; Huaixing Cang; Lanqing Ma
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-27

2.  Synthesis of unnatural alkaloid scaffolds by exploiting plant polyketide synthase.

Authors:  Hiroyuki Morita; Makoto Yamashita; She-Po Shi; Toshiyuki Wakimoto; Shin Kondo; Ryohei Kato; Shigetoshi Sugio; Toshiyuki Kohno; Ikuro Abe
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-08       Impact factor: 11.205

3.  Structural basis for the formation of acylalkylpyrones from two β-ketoacyl units by the fungal type III polyketide synthase CsyB.

Authors:  Takahiro Mori; Dengfeng Yang; Takashi Matsui; Makoto Hashimoto; Hiroyuki Morita; Isao Fujii; Ikuro Abe
Journal:  J Biol Chem       Date:  2015-01-06       Impact factor: 5.157

Review 4.  Heterologous production of curcuminoids.

Authors:  J L Rodrigues; K L J Prather; L D Kluskens; L R Rodrigues
Journal:  Microbiol Mol Biol Rev       Date:  2015-03       Impact factor: 11.056

Review 5.  How structural subtleties lead to molecular diversity for the type III polyketide synthases.

Authors:  Hiroyuki Morita; Chin Piow Wong; Ikuro Abe
Journal:  J Biol Chem       Date:  2019-08-30       Impact factor: 5.157

6.  2-Alkylquinolone alkaloid biosynthesis in the medicinal plant Evodia rutaecarpa involves collaboration of two novel type III polyketide synthases.

Authors:  Takashi Matsui; Takeshi Kodama; Takahiro Mori; Tetsuhiro Tadakoshi; Hiroshi Noguchi; Ikuro Abe; Hiroyuki Morita
Journal:  J Biol Chem       Date:  2017-04-14       Impact factor: 5.157

7.  Cloning and structure-function analyses of quinolone- and acridone-producing novel type III polyketide synthases from Citrus microcarpa.

Authors:  Takahiro Mori; Yoshihiko Shimokawa; Takashi Matsui; Keishi Kinjo; Ryohei Kato; Hiroshi Noguchi; Shigetoshi Sugio; Hiroyuki Morita; Ikuro Abe
Journal:  J Biol Chem       Date:  2013-08-20       Impact factor: 5.157

Review 8.  Recent advances in combinatorial biosynthesis for drug discovery.

Authors:  Huihua Sun; Zihe Liu; Huimin Zhao; Ee Lui Ang
Journal:  Drug Des Devel Ther       Date:  2015-02-12       Impact factor: 4.162

9.  Significant reduction in errors associated with nonbonded contacts in protein crystal structures: automated all-atom refinement with PrimeX.

Authors:  Jeffrey A Bell; Kenneth L Ho; Ramy Farid
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-07-17

Review 10.  Gates of enzymes.

Authors:  Artur Gora; Jan Brezovsky; Jiri Damborsky
Journal:  Chem Rev       Date:  2013-04-25       Impact factor: 60.622

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