Literature DB >> 21030646

Epigenetic reprogramming in plant and animal development.

Suhua Feng1, Steven E Jacobsen, Wolf Reik.   

Abstract

Epigenetic modifications of the genome are generally stable in somatic cells of multicellular organisms. In germ cells and early embryos, however, epigenetic reprogramming occurs on a genome-wide scale, which includes demethylation of DNA and remodeling of histones and their modifications. The mechanisms of genome-wide erasure of DNA methylation, which involve modifications to 5-methylcytosine and DNA repair, are being unraveled. Epigenetic reprogramming has important roles in imprinting, the natural as well as experimental acquisition of totipotency and pluripotency, control of transposons, and epigenetic inheritance across generations. Small RNAs and the inheritance of histone marks may also contribute to epigenetic inheritance and reprogramming. Reprogramming occurs in flowering plants and in mammals, and the similarities and differences illuminate developmental and reproductive strategies.

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Year:  2010        PMID: 21030646      PMCID: PMC2989926          DOI: 10.1126/science.1190614

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  59 in total

1.  Distinct dynamics of HISTONE3 variants between the two fertilization products in plants.

Authors:  Mathieu Ingouff; Yuki Hamamura; Mathieu Gourgues; Tetsuya Higashiyama; Frédéric Berger
Journal:  Curr Biol       Date:  2007-06-07       Impact factor: 10.834

2.  Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development.

Authors:  Ryutaro Hirasawa; Hatsune Chiba; Masahiro Kaneda; Shoji Tajima; En Li; Rudolf Jaenisch; Hiroyuki Sasaki
Journal:  Genes Dev       Date:  2008-06-15       Impact factor: 11.361

3.  Active demethylation of the paternal genome in the mouse zygote.

Authors:  J Oswald; S Engemann; N Lane; W Mayer; A Olek; R Fundele; W Dean; W Reik; J Walter
Journal:  Curr Biol       Date:  2000-04-20       Impact factor: 10.834

Review 4.  Establishing, maintaining and modifying DNA methylation patterns in plants and animals.

Authors:  Julie A Law; Steven E Jacobsen
Journal:  Nat Rev Genet       Date:  2010-03       Impact factor: 53.242

5.  DNA demethylation in the Arabidopsis genome.

Authors:  Jon Penterman; Daniel Zilberman; Jin Hoe Huh; Tracy Ballinger; Steven Henikoff; Robert L Fischer
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-04       Impact factor: 11.205

6.  Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail.

Authors:  Yingying Zhang; Renata Jurkowska; Szabolcs Soeroes; Arumugam Rajavelu; Arunkumar Dhayalan; Ina Bock; Philipp Rathert; Ole Brandt; Richard Reinhardt; Wolfgang Fischle; Albert Jeltsch
Journal:  Nucleic Acids Res       Date:  2010-03-11       Impact factor: 16.971

7.  Genome-wide demethylation of Arabidopsis endosperm.

Authors:  Tzung-Fu Hsieh; Christian A Ibarra; Pedro Silva; Assaf Zemach; Leor Eshed-Williams; Robert L Fischer; Daniel Zilberman
Journal:  Science       Date:  2009-06-12       Impact factor: 47.728

8.  CpG islands influence chromatin structure via the CpG-binding protein Cfp1.

Authors:  John P Thomson; Peter J Skene; Jim Selfridge; Thomas Clouaire; Jacky Guy; Shaun Webb; Alastair R W Kerr; Aimée Deaton; Rob Andrews; Keith D James; Daniel J Turner; Robert Illingworth; Adrian Bird
Journal:  Nature       Date:  2010-04-15       Impact factor: 49.962

9.  Direct cell reprogramming is a stochastic process amenable to acceleration.

Authors:  Jacob Hanna; Krishanu Saha; Bernardo Pando; Jeroen van Zon; Christopher J Lengner; Menno P Creyghton; Alexander van Oudenaarden; Rudolf Jaenisch
Journal:  Nature       Date:  2009-11-08       Impact factor: 49.962

10.  Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes.

Authors:  Cassandra R Farthing; Gabriella Ficz; Ray Kit Ng; Chun-Fung Chan; Simon Andrews; Wendy Dean; Myriam Hemberger; Wolf Reik
Journal:  PLoS Genet       Date:  2008-06-27       Impact factor: 5.917

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  399 in total

Review 1.  Environmental epigenetic transgenerational inheritance and somatic epigenetic mitotic stability.

Authors:  Michael K Skinner
Journal:  Epigenetics       Date:  2011-07-01       Impact factor: 4.528

Review 2.  Epigenetics and the environment: emerging patterns and implications.

Authors:  Robert Feil; Mario F Fraga
Journal:  Nat Rev Genet       Date:  2012-01-04       Impact factor: 53.242

3.  Plant biology: Equal-parenting policy.

Authors:  Christopher J Hale; Steven E Jacobsen
Journal:  Nature       Date:  2012-01-22       Impact factor: 49.962

4.  Global profiling of DNA methylation erasure in mouse primordial germ cells.

Authors:  Sylvain Guibert; Thierry Forné; Michael Weber
Journal:  Genome Res       Date:  2012-02-22       Impact factor: 9.043

Review 5.  Male germline control of transposable elements.

Authors:  Jianqiang Bao; Wei Yan
Journal:  Biol Reprod       Date:  2012-05-31       Impact factor: 4.285

Review 6.  Epigenetic inheritance of disease and disease risk.

Authors:  Johannes Bohacek; Isabelle M Mansuy
Journal:  Neuropsychopharmacology       Date:  2012-07-11       Impact factor: 7.853

7.  PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos.

Authors:  Toshinobu Nakamura; Yu-Jung Liu; Hiroyuki Nakashima; Hiroki Umehara; Kimiko Inoue; Shogo Matoba; Makoto Tachibana; Atsuo Ogura; Yoichi Shinkai; Toru Nakano
Journal:  Nature       Date:  2012-06-03       Impact factor: 49.962

8.  DNA Crossover Motifs Associated with Epigenetic Modifications Delineate Open Chromatin Regions in Arabidopsis.

Authors:  Shay Shilo; Cathy Melamed-Bessudo; Yanniv Dorone; Naama Barkai; Avraham A Levy
Journal:  Plant Cell       Date:  2015-09-17       Impact factor: 11.277

Review 9.  Nutriepigenetic regulation by folate-homocysteine-methionine axis: a review.

Authors:  Seema Bhargava; S C Tyagi
Journal:  Mol Cell Biochem       Date:  2013-11-10       Impact factor: 3.396

10.  Expression of TET and 5-HmC in Trophoblast Villi of Women with Normal Pregnancy and with Early Pregnancy Loss.

Authors:  Ai-Hua Wu; Dong-Yu Yang; Yu-Dong Liu; Xin Chen; Xu-Long Chen; Shan Lu; Shi-Ling Chen
Journal:  Curr Med Sci       Date:  2018-06-22
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