Literature DB >> 21030291

Chemoenzymatic methods for site-specific protein modification.

David Rabuka1.   

Abstract

In the past decade, numerous chemical technologies have been developed to allow the site-specific post-translational modification of proteins. Traditionally covalent chemical protein modification has been accomplished by the attachment of synthetic groups to nucleophilic amino acids on protein surfaces. These chemistries, however, are rarely sufficiently selective to distinguish one residue within a literal sea of chemical functionality. One solution to this problem is to introduce a unique chemical handle into the target protein that is orthogonal to the remainder of the proteome. In practice, this handle can be a novel peptide sequence, which forms a 'tag' that is selectively and irreversibly modified by enzymes. Furthermore, if the enzymes can tolerate substrate analogs, it becomes possible to engineer chemically modified proteins in a site-specific fashion. This review details the significant progress in creating techniques for the chemoenzymatic generation of protein-small molecule constructs and provides examples of novel applications of these methodologies.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 21030291      PMCID: PMC2997875          DOI: 10.1016/j.cbpa.2010.09.020

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  30 in total

1.  A general method for the covalent labeling of fusion proteins with small molecules in vivo.

Authors:  Antje Keppler; Susanne Gendreizig; Thomas Gronemeyer; Horst Pick; Horst Vogel; Kai Johnsson
Journal:  Nat Biotechnol       Date:  2002-12-09       Impact factor: 54.908

2.  Labeling of fusion proteins with synthetic fluorophores in live cells.

Authors:  Antje Keppler; Horst Pick; Claudio Arrivoli; Horst Vogel; Kai Johnsson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-28       Impact factor: 11.205

3.  HaloTag protein-mediated site-specific conjugation of bioluminescent proteins to quantum dots.

Authors:  Yan Zhang; Min-Kyung So; Andreas M Loening; Hequan Yao; Sanjiv S Gambhir; Jianghong Rao
Journal:  Angew Chem Int Ed Engl       Date:  2006-07-24       Impact factor: 15.336

4.  Genetically encoded short peptide tags for orthogonal protein labeling by Sfp and AcpS phosphopantetheinyl transferases.

Authors:  Zhe Zhou; Pablo Cironi; Alison J Lin; Yangqing Xu; Sinisa Hrvatin; David E Golan; Pamela A Silver; Christopher T Walsh; Jun Yin
Journal:  ACS Chem Biol       Date:  2007-04-27       Impact factor: 5.100

5.  Site specific conjugation of fluoroprobes to the remodeled Fc N-glycans of monoclonal antibodies using mutant glycosyltransferases: application for cell surface antigen detection.

Authors:  Elizabeth Boeggeman; Boopathy Ramakrishnan; Marta Pasek; Maria Manzoni; Anu Puri; Kristin H Loomis; Timothy J Waybright; Pradman K Qasba
Journal:  Bioconjug Chem       Date:  2009-06       Impact factor: 4.774

6.  Site-specific labeling of cell surface proteins with biophysical probes using biotin ligase.

Authors:  Irwin Chen; Mark Howarth; Weiying Lin; Alice Y Ting
Journal:  Nat Methods       Date:  2005-01-21       Impact factor: 28.547

7.  Transglutaminase-catalyzed site-specific conjugation of small-molecule probes to proteins in vitro and on the surface of living cells.

Authors:  Chi-Wang Lin; Alice Y Ting
Journal:  J Am Chem Soc       Date:  2006-04-12       Impact factor: 15.419

8.  GlycoPEGylation of recombinant therapeutic proteins produced in Escherichia coli.

Authors:  Shawn DeFrees; Zhi-Guang Wang; Ruye Xing; Arthur E Scott; Jin Wang; David Zopf; Dominique L Gouty; Eric R Sjoberg; Krishnasamy Panneerselvam; Els C M Brinkman-Van der Linden; Robert J Bayer; Mads A Tarp; Henrik Clausen
Journal:  Glycobiology       Date:  2006-05-22       Impact factor: 4.313

9.  Introducing genetically encoded aldehydes into proteins.

Authors:  Isaac S Carrico; Brian L Carlson; Carolyn R Bertozzi
Journal:  Nat Chem Biol       Date:  2007-04-22       Impact factor: 15.040

10.  Specific and covalent labeling of a membrane protein with organic fluorochromes and quantum dots.

Authors:  Roberto Bonasio; Christopher V Carman; Enoch Kim; Peter T Sage; Kerry R Love; Thorsten R Mempel; Timothy A Springer; Ulrich H von Andrian
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-04       Impact factor: 11.205

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  33 in total

Review 1.  Enzymatic labeling of proteins: techniques and approaches.

Authors:  Mohammad Rashidian; Jonathan K Dozier; Mark D Distefano
Journal:  Bioconjug Chem       Date:  2013-08-21       Impact factor: 4.774

2.  Click Triazoles for Bioconjugation.

Authors:  Tianqing Zheng; Sara H Rouhanifard; Abubakar S Jalloh; Peng Wu
Journal:  Top Heterocycl Chem       Date:  2012

Review 3.  Impact of physiochemical properties on pharmacokinetics of protein therapeutics.

Authors:  Rajan Swami; Aliasgar Shahiwala
Journal:  Eur J Drug Metab Pharmacokinet       Date:  2013-04-14       Impact factor: 2.441

Review 4.  Site-Specifically Labeled Immunoconjugates for Molecular Imaging--Part 2: Peptide Tags and Unnatural Amino Acids.

Authors:  Pierre Adumeau; Sai Kiran Sharma; Colleen Brent; Brian M Zeglis
Journal:  Mol Imaging Biol       Date:  2016-04       Impact factor: 3.488

Review 5.  Chemically programmed antibodies.

Authors:  Christoph Rader
Journal:  Trends Biotechnol       Date:  2014-03-11       Impact factor: 19.536

Review 6.  Engineered control of enzyme structural dynamics and function.

Authors:  David D Boehr; Rebecca N D'Amico; Kathleen F O'Rourke
Journal:  Protein Sci       Date:  2018-02-16       Impact factor: 6.725

Review 7.  Visualizing protein partnerships in living cells and organisms.

Authors:  Melissa A Lowder; Jacob S Appelbaum; Elissa M Hobert; Alanna Schepartz
Journal:  Curr Opin Chem Biol       Date:  2011-11-19       Impact factor: 8.822

8.  Π-Clamp-mediated cysteine conjugation.

Authors:  Chi Zhang; Matthew Welborn; Tianyu Zhu; Nicole J Yang; Michael S Santos; Troy Van Voorhis; Bradley L Pentelute
Journal:  Nat Chem       Date:  2015-12-21       Impact factor: 24.427

9.  Site-specific protein labeling via sortase-mediated transpeptidation.

Authors:  Maximilian Wei-Lin Popp; John M Antos; Hidde L Ploegh
Journal:  Curr Protoc Protein Sci       Date:  2009-04

10.  Simultaneous Site-Specific Dual Protein Labeling Using Protein Prenyltransferases.

Authors:  Yi Zhang; Melanie J Blanden; Ch Sudheer; Soumyashree A Gangopadhyay; Mohammad Rashidian; James L Hougland; Mark D Distefano
Journal:  Bioconjug Chem       Date:  2015-12-04       Impact factor: 4.774

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