Literature DB >> 20974139

The role of deubiquitinating enzymes in chromatin regulation.

Boyko S Atanassov1, Evangelia Koutelou, Sharon Y Dent.   

Abstract

Post-translational modifications of the histones are centrally involved in the regulation of all DNA-templated processes, including gene transcription, DNA replication, recombination, and repair. These modifications are often dynamic, and their removal is just as important as their addition in proper regulation of cellular functions. Although histone acetylation/deacetylation and histone methylation/demethylation are highly studied, the functions and regulation of histone ubiquitination and deubiquitination are less well understood. This review highlights our current understanding of how histone ubiquitination impacts gene transcription, DNA repair, and cell cycle progression, and stresses the importance of deubiquitinases to normal cellular functions as well as to disease states such as cancer.
Copyright © 2010 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20974139      PMCID: PMC3036772          DOI: 10.1016/j.febslet.2010.10.042

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  81 in total

Review 1.  Regulation of DNA repair by ubiquitylation.

Authors:  Tony T Huang; Alan D D'Andrea
Journal:  Nat Rev Mol Cell Biol       Date:  2006-05       Impact factor: 94.444

2.  Critical role for Daxx in regulating Mdm2.

Authors:  Jun Tang; Li-Ke Qu; Jianke Zhang; Wenge Wang; Jennifer S Michaelson; Yan Y Degenhardt; Wafik S El-Deiry; Xiaolu Yang
Journal:  Nat Cell Biol       Date:  2006-07-16       Impact factor: 28.824

3.  Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II.

Authors:  Rushad Pavri; Bing Zhu; Guohong Li; Patrick Trojer; Subhrangsu Mandal; Ali Shilatifard; Danny Reinberg
Journal:  Cell       Date:  2006-05-19       Impact factor: 41.582

4.  FOXO4 transcriptional activity is regulated by monoubiquitination and USP7/HAUSP.

Authors:  Armando van der Horst; Alida M M de Vries-Smits; Arjan B Brenkman; Miranda H van Triest; Niels van den Broek; Frédéric Colland; Madelon M Maurice; Boudewijn M T Burgering
Journal:  Nat Cell Biol       Date:  2006-09-10       Impact factor: 28.824

Review 5.  Polycomb silencers control cell fate, development and cancer.

Authors:  Anke Sparmann; Maarten van Lohuizen
Journal:  Nat Rev Cancer       Date:  2006-11       Impact factor: 60.716

6.  H2B ubiquitylation acts as a barrier to Ctk1 nucleosomal recruitment prior to removal by Ubp8 within a SAGA-related complex.

Authors:  Anastasia Wyce; Tiaojiang Xiao; Kelly A Whelan; Christine Kosman; Wendy Walter; Dirk Eick; Timothy R Hughes; Nevan J Krogan; Brian D Strahl; Shelley L Berger
Journal:  Mol Cell       Date:  2007-07-20       Impact factor: 17.970

Review 7.  Genomic models of metastatic cancer: functional analysis of death-from-cancer signature genes reveals aneuploid, anoikis-resistant, metastasis-enabling phenotype with altered cell cycle control and activated Polycomb Group (PcG) protein chromatin silencing pathway.

Authors:  Gennadi V Glinsky
Journal:  Cell Cycle       Date:  2006-06-01       Impact factor: 4.534

8.  Ubp8p, a histone deubiquitinase whose association with SAGA is mediated by Sgf11p, differentially regulates lysine 4 methylation of histone H3 in vivo.

Authors:  Abhijit Shukla; Nadia Stanojevic; Zhen Duan; Payel Sen; Sukesh R Bhaumik
Journal:  Mol Cell Biol       Date:  2006-05       Impact factor: 4.272

9.  RAP80 targets BRCA1 to specific ubiquitin structures at DNA damage sites.

Authors:  Bijan Sobhian; Genze Shao; Dana R Lilli; Aedín C Culhane; Lisa A Moreau; Bing Xia; David M Livingston; Roger A Greenberg
Journal:  Science       Date:  2007-05-25       Impact factor: 47.728

Review 10.  Regulation of the INK4b-ARF-INK4a tumour suppressor locus: all for one or one for all.

Authors:  Jesús Gil; Gordon Peters
Journal:  Nat Rev Mol Cell Biol       Date:  2006-09       Impact factor: 94.444

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  31 in total

Review 1.  A double take on bivalent promoters.

Authors:  Philipp Voigt; Wee-Wei Tee; Danny Reinberg
Journal:  Genes Dev       Date:  2013-06-15       Impact factor: 11.361

2.  Activation of gene expression by histone deubiquitinase OTLD1.

Authors:  Ido Keren; Vitaly Citovsky
Journal:  Epigenetics       Date:  2017-07-13       Impact factor: 4.528

Review 3.  Deubiquitinases (DUBs) and DUB inhibitors: a patent review.

Authors:  Pershang Farshi; Rahul R Deshmukh; Joseph O Nwankwo; Richard T Arkwright; Boris Cvek; Jinbao Liu; Q Ping Dou
Journal:  Expert Opin Ther Pat       Date:  2015-06-16       Impact factor: 6.674

4.  SAGA function in tissue-specific gene expression.

Authors:  Vikki M Weake; Jerry L Workman
Journal:  Trends Cell Biol       Date:  2011-12-21       Impact factor: 20.808

5.  Neuroanatomical profile of antimaniac effects of histone deacetylases inhibitors.

Authors:  Camila O Arent; Samira S Valvassori; Gabriel R Fries; Laura Stertz; Camila L Ferreira; Jéssica Lopes-Borges; Edemilson Mariot; Roger B Varela; Felipe Ornell; Flávio Kapczinski; Monica L Andersen; João Quevedo
Journal:  Mol Neurobiol       Date:  2011-03-22       Impact factor: 5.590

6.  The role of components of the chromatin modification machinery in carcinogenesis of clear cell carcinoma of the ovary (Review).

Authors:  Hiroshi Shigetomi; Akira Oonogi; Taihei Tsunemi; Yasuhito Tanase; Yoshihiko Yamada; Hirotaka Kajihara; Yoriko Yoshizawa; Naoto Furukawa; Shoji Haruta; Shozo Yoshida; Toshiyuki Sado; Hidekazu Oi; Hiroshi Kobayashi
Journal:  Oncol Lett       Date:  2011-05-16       Impact factor: 2.967

Review 7.  SGF29 and Sry pathway in hepatocarcinogenesis.

Authors:  Nobuya Kurabe; Shigekazu Murakami; Fumio Tashiro
Journal:  World J Biol Chem       Date:  2015-08-26

8.  Epigenetic control of dendritic cell development and fate determination of common myeloid progenitor by Mysm1.

Authors:  Haejung Won; Vijayalakshmi Nandakumar; Peter Yates; Suzi Sanchez; Lindsey Jones; Xue F Huang; Si-Yi Chen
Journal:  Blood       Date:  2014-09-12       Impact factor: 22.113

Review 9.  Epigenetic regulation of estrogen-dependent memory.

Authors:  Ashley M Fortress; Karyn M Frick
Journal:  Front Neuroendocrinol       Date:  2014-05-28       Impact factor: 8.606

10.  Structure-Guided Development of a Potent and Selective Non-covalent Active-Site Inhibitor of USP7.

Authors:  Ilaria Lamberto; Xiaoxi Liu; Hyuk-Soo Seo; Nathan J Schauer; Roxana E Iacob; Wanyi Hu; Deepika Das; Tatiana Mikhailova; Ellen L Weisberg; John R Engen; Kenneth C Anderson; Dharminder Chauhan; Sirano Dhe-Paganon; Sara J Buhrlage
Journal:  Cell Chem Biol       Date:  2017-10-19       Impact factor: 8.116

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