Literature DB >> 20971646

Protein kinases: evolution of dynamic regulatory proteins.

Susan S Taylor1, Alexandr P Kornev.   

Abstract

Eukayotic protein kinases evolved as a family of highly dynamic molecules with strictly organized internal architecture. A single hydrophobic F-helix serves as a central scaffold for assembly of the entire molecule. Two non-consecutive hydrophobic structures termed "spines" anchor all the elements important for catalysis to the F-helix. They make firm, but flexible, connections within the molecule, providing a high level of internal dynamics of the protein kinase. During the course of evolution, protein kinases developed a universal regulatory mechanism associated with a large activation segment that can be dynamically folded and unfolded in the course of cell functioning. Protein kinases thus represent a unique, highly dynamic, and precisely regulated set of switches that control most biological events in eukaryotic cells.
Copyright © 2010. Published by Elsevier Ltd.

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Year:  2010        PMID: 20971646      PMCID: PMC3084033          DOI: 10.1016/j.tibs.2010.09.006

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  59 in total

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Authors:  Gürol M Süel; Steve W Lockless; Mark A Wall; Rama Ranganathan
Journal:  Nat Struct Biol       Date:  2003-01

Review 3.  Activation loop phosphorylation and catalysis in protein kinases: is there functional evidence for the autoinhibitor model?

Authors:  Joseph A Adams
Journal:  Biochemistry       Date:  2003-01-28       Impact factor: 3.162

4.  An adenosine 3',5'-monophosphate-dependant protein kinase from rabbit skeletal muscle.

Authors:  D A Walsh; J P Perkins; E G Krebs
Journal:  J Biol Chem       Date:  1968-07-10       Impact factor: 5.157

5.  Viral src gene products are related to the catalytic chain of mammalian cAMP-dependent protein kinase.

Authors:  W C Barker; M O Dayhoff
Journal:  Proc Natl Acad Sci U S A       Date:  1982-05       Impact factor: 11.205

6.  Dynamic features of cAMP-dependent protein kinase revealed by apoenzyme crystal structure.

Authors:  Pearl Akamine; Jian Wu; Nguyen-Huu Xuong; Lynn F Ten Eyck; Susan S Taylor
Journal:  J Mol Biol       Date:  2003-03-14       Impact factor: 5.469

7.  A new mutation in the KIT ATP pocket causes acquired resistance to imatinib in a gastrointestinal stromal tumor patient.

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Journal:  Gastroenterology       Date:  2004-07       Impact factor: 22.682

8.  Crystal structure of the catalytic subunit of cyclic adenosine monophosphate-dependent protein kinase.

Authors:  D R Knighton; J H Zheng; L F Ten Eyck; V A Ashford; N H Xuong; S S Taylor; J M Sowadski
Journal:  Science       Date:  1991-07-26       Impact factor: 47.728

Review 9.  Evolution of protein kinase signaling from yeast to man.

Authors:  Gerard Manning; Gregory D Plowman; Tony Hunter; Sucha Sudarsanam
Journal:  Trends Biochem Sci       Date:  2002-10       Impact factor: 13.807

10.  Molecular mechanism for the regulation of protein kinase B/Akt by hydrophobic motif phosphorylation.

Authors:  Jing Yang; Peter Cron; Vivienne Thompson; Valerie M Good; Daniel Hess; Brian A Hemmings; David Barford
Journal:  Mol Cell       Date:  2002-06       Impact factor: 17.970

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  355 in total

Review 1.  Catalytic mechanisms and regulation of protein kinases.

Authors:  Zhihong Wang; Philip A Cole
Journal:  Methods Enzymol       Date:  2014       Impact factor: 1.600

2.  Interrogating the kinome.

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Journal:  Nat Biotechnol       Date:  2011-11-08       Impact factor: 54.908

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Journal:  J Biol Chem       Date:  2012-02-24       Impact factor: 5.157

4.  The distribution of ligand-binding pockets around protein-protein interfaces suggests a general mechanism for pocket formation.

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-21       Impact factor: 11.205

5.  "DFG-flip" in the insulin receptor kinase is facilitated by a helical intermediate state of the activation loop.

Authors:  Harish Vashisth; Luca Maragliano; Cameron F Abrams
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

6.  Heat dissipation guides activation in signaling proteins.

Authors:  Jeffrey K Weber; Diwakar Shukla; Vijay S Pande
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-03       Impact factor: 11.205

7.  Allosteric Control of a Plant Receptor Kinase through S-Glutathionylation.

Authors:  Alexander S Moffett; Kyle W Bender; Steven C Huber; Diwakar Shukla
Journal:  Biophys J       Date:  2017-12-05       Impact factor: 4.033

Review 8.  Evolution of a dynamic molecular switch.

Authors:  Susan S Taylor; Hiruy S Meharena; Alexandr P Kornev
Journal:  IUBMB Life       Date:  2019-05-06       Impact factor: 3.885

9.  Protein AMPylation by an Evolutionarily Conserved Pseudokinase.

Authors:  Anju Sreelatha; Samantha S Yee; Victor A Lopez; Brenden C Park; Lisa N Kinch; Sylwia Pilch; Kelly A Servage; Junmei Zhang; Jenny Jiou; Monika Karasiewicz-Urbańska; Małgorzata Łobocka; Nick V Grishin; Kim Orth; Roza Kucharczyk; Krzysztof Pawłowski; Diana R Tomchick; Vincent S Tagliabracci
Journal:  Cell       Date:  2018-09-27       Impact factor: 41.582

10.  Activation and inhibition of Snf1 kinase activity by phosphorylation within the activation loop.

Authors:  Rhonda R McCartney; Leopold Garnar-Wortzel; Dakshayini G Chandrashekarappa; Martin C Schmidt
Journal:  Biochim Biophys Acta       Date:  2016-08-12
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