Literature DB >> 20961847

Novel fold and carbohydrate specificity of the potent anti-HIV cyanobacterial lectin from Oscillatoria agardhii.

Leonardus M I Koharudin1, William Furey, Angela M Gronenborn.   

Abstract

Oscillatoria agardhii agglutinin (OAA) is a recently discovered cyanobacterial lectin that exhibits potent anti-HIV activity. Up to now, only its primary structure and carbohydrate binding data have been available. To elucidate the structural basis for the antiviral mechanism of OAA, we determined the structure of this lectin by x-ray crystallography at 1.2 Å resolution and mapped the specific carbohydrate recognition sites of OAA by NMR spectroscopy. The overall architecture of OAA comprises 10 β-strands that fold into a single, compact, β-barrel-like domain, creating a unique topology compared with all known protein structures in the Protein Data Bank. OAA sugar binding was tested against Man-9 and various disaccharide components of Man-9. Two symmetric carbohydrate-binding sites were located on the protein, and a preference for Manα(1-6)Man-linked sugars was found. Altogether, our structural results explain the antiviral activity OAA and add to the growing body of knowledge about antiviral lectins.

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Year:  2010        PMID: 20961847      PMCID: PMC3020767          DOI: 10.1074/jbc.M110.173278

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  36 in total

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2.  A potent novel anti-HIV protein from the cultured cyanobacterium Scytonema varium.

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10.  Domain-swapped structure of the potent antiviral protein griffithsin and its mode of carbohydrate binding.

Authors:  Natasza E Ziółkowska; Barry R O'Keefe; Toshiyuki Mori; Charles Zhu; Barbara Giomarelli; Fakhrieh Vojdani; Kenneth E Palmer; James B McMahon; Alexander Wlodawer
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  28 in total

1.  Speeding-up exchange-mediated saturation transfer experiments by Fourier transform.

Authors:  Marta G Carneiro; Jithender G Reddy; Christian Griesinger; Donghan Lee
Journal:  J Biomol NMR       Date:  2015-09-09       Impact factor: 2.835

2.  Sampling of Glycan-Bound Conformers by the Anti-HIV Lectin Oscillatoria agardhii agglutinin in the Absence of Sugar.

Authors:  Marta G Carneiro; Leonardus M I Koharudin; David Ban; T Michael Sabo; Pablo Trigo-Mourino; Adam Mazur; Christian Griesinger; Angela M Gronenborn; Donghan Lee
Journal:  Angew Chem Int Ed Engl       Date:  2015-04-14       Impact factor: 15.336

3.  Enhanced accuracy of kinetic information from CT-CPMG experiments by transverse rotating-frame spectroscopy.

Authors:  David Ban; Adam Mazur; Marta G Carneiro; T Michael Sabo; Karin Giller; Leonardus M I Koharudin; Stefan Becker; Angela M Gronenborn; Christian Griesinger; Donghan Lee
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4.  Structural basis of the anti-HIV activity of the cyanobacterial Oscillatoria Agardhii agglutinin.

Authors:  Leonardus M I Koharudin; Angela M Gronenborn
Journal:  Structure       Date:  2011-08-10       Impact factor: 5.006

5.  Toward Closing the Gap: Quantum Mechanical Calculations and Experimentally Measured Chemical Shifts of a Microcrystalline Lectin.

Authors:  Matthew Fritz; Caitlin M Quinn; Mingzhang Wang; Guangjin Hou; Xingyu Lu; Leonardus M I Koharudin; Tatyana Polenova; Angela M Gronenborn
Journal:  J Phys Chem B       Date:  2016-12-21       Impact factor: 2.991

6.  (1)H, (13)C and (15)N resonance assignment of the anti-HIV lectin from Oscillatoria agardhii.

Authors:  Marta G Carneiro; Leonardus M I Koharudin; Christian Griesinger; Angela M Gronenborn; Donghan Lee
Journal:  Biomol NMR Assign       Date:  2015-02-14       Impact factor: 0.746

7.  Integrating NMR, SAXS, and Atomistic Simulations: Structure and Dynamics of a Two-Domain Protein.

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8.  Determination of accurate backbone chemical shift tensors in microcrystalline proteins by integrating MAS NMR and QM/MM.

Authors:  Matthew Fritz; Caitlin M Quinn; Mingzhang Wang; Guangjin Hou; Xingyu Lu; Leonardus M I Koharudin; Jochem Struppe; David A Case; Tatyana Polenova; Angela M Gronenborn
Journal:  Phys Chem Chem Phys       Date:  2018-04-04       Impact factor: 3.676

Review 9.  Anti-tumor and anti-viral activities of Galanthus nivalis agglutinin (GNA)-related lectins.

Authors:  Lei Wu; Jin-Ku Bao
Journal:  Glycoconj J       Date:  2012-08-15       Impact factor: 2.916

10.  Burkholderia oklahomensis agglutinin is a canonical two-domain OAA-family lectin: structures, carbohydrate binding and anti-HIV activity.

Authors:  Matthew J Whitley; William Furey; Sireesha Kollipara; Angela M Gronenborn
Journal:  FEBS J       Date:  2013-04-02       Impact factor: 5.542

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