Literature DB >> 20956303

Adaptation and extinction in experimentally fragmented landscapes.

Sima Fakheran1, Cloé Paul-Victor, Christian Heichinger, Bernhard Schmid, Ueli Grossniklaus, Lindsay A Turnbull.   

Abstract

Competition and disturbance are potent ecological forces that shape evolutionary trajectories. These forces typically work in opposition: when disturbance is infrequent, densities are high and competition is intense. In contrast, frequent disturbance creates a low-density environment in which competition is weak and good dispersal essential. We exploited recent advances in genomic research to quantify the response to selection by these powerful ecological forces at the phenotypic and molecular genetic level in experimental landscapes. We grew the annual plant Arabidopsis thaliana in discrete patches embedded in a hostile matrix and varied the number and size of patches and the intensity of disturbance, by creating both static and dynamic landscapes. In static landscapes all patches were undisturbed, whereas in dynamic landscapes all patches were destroyed in each generation, forcing seeds to disperse to new locations. We measured the resulting changes in phenotypic, genetic, and genotypic diversity after five generations of selection. Simulations revealed that the observed loss of genetic diversity dwarfed that expected under drift, with dramatic diversity loss, particularly from dynamic landscapes. In line with ecological theory, static landscapes favored good competitors; however, competitive ability was linked to growth rate and not, as expected, to seed mass. In dynamic landscapes, there was strong selection for increased dispersal ability in the form of increased inflorescence height and reduced seed mass. The most competitive genotypes were almost eliminated from highly disturbed landscapes, raising concern over the impact of increased levels of human-induced disturbance in natural landscapes.

Entities:  

Mesh:

Year:  2010        PMID: 20956303      PMCID: PMC2973902          DOI: 10.1073/pnas.1010846107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

1.  Disturbance and diversity in experimental microcosms.

Authors:  A Buckling; R Kassen; G Bell; P B Rainey
Journal:  Nature       Date:  2000 Dec 21-28       Impact factor: 49.962

2.  A physical amplified fragment-length polymorphism map of Arabidopsis.

Authors:  J L Peters; H Constandt; P Neyt; G Cnops; J Zethof; M Zabeau; T Gerats
Journal:  Plant Physiol       Date:  2001-12       Impact factor: 8.340

3.  Light-response quantitative trait loci identified with composite interval and eXtreme array mapping in Arabidopsis thaliana.

Authors:  David J Wolyn; Justin O Borevitz; Olivier Loudet; Chris Schwartz; Julin Maloof; Joseph R Ecker; Charles C Berry; Joanne Chory
Journal:  Genetics       Date:  2004-06       Impact factor: 4.562

4.  Genotyping and mapping with high-density oligonucleotide arrays.

Authors:  Justin Borevitz
Journal:  Methods Mol Biol       Date:  2006

5.  Why equalising trade-offs aren't always neutral.

Authors:  Lindsay A Turnbull; Mark Rees; Drew W Purves
Journal:  Ecol Lett       Date:  2008-10       Impact factor: 9.492

6.  System-wide molecular evidence for phenotypic buffering in Arabidopsis.

Authors:  Jingyuan Fu; Joost J B Keurentjes; Harro Bouwmeester; Twan America; Francel W A Verstappen; Jane L Ward; Michael H Beale; Ric C H de Vos; Martijn Dijkstra; Richard A Scheltema; Frank Johannes; Maarten Koornneef; Dick Vreugdenhil; Rainer Breitling; Ritsert C Jansen
Journal:  Nat Genet       Date:  2009-01-25       Impact factor: 38.330

7.  Why trees migrate so fast: confronting theory with dispersal biology and the paleorecord.

Authors:  J S Clark
Journal:  Am Nat       Date:  1998-08       Impact factor: 3.926

8.  Rapid array mapping of circadian clock and developmental mutations in Arabidopsis.

Authors:  Samuel P Hazen; Justin O Borevitz; Frank G Harmon; Jose L Pruneda-Paz; Thomas F Schultz; Marcelo J Yanovsky; Sarah J Liljegren; Joseph R Ecker; Steve A Kay
Journal:  Plant Physiol       Date:  2005-05-20       Impact factor: 8.340

9.  Herbivory and abiotic factors affect population dynamics of Arabidopsis thaliana in a sand dune area.

Authors:  A Mosleh Arany; T J de Jong; E van der Meijden
Journal:  Plant Biol (Stuttg)       Date:  2005-09       Impact factor: 3.081

10.  Large-scale identification of single-feature polymorphisms in complex genomes.

Authors:  Justin O Borevitz; David Liang; David Plouffe; Hur-Song Chang; Tong Zhu; Detlef Weigel; Charles C Berry; Elizabeth Winzeler; Joanne Chory
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

View more
  15 in total

Review 1.  Natural variation in Arabidopsis: from molecular genetics to ecological genomics.

Authors:  Detlef Weigel
Journal:  Plant Physiol       Date:  2011-12-06       Impact factor: 8.340

2.  Arabidopsis semidwarfs evolved from independent mutations in GA20ox1, ortholog to green revolution dwarf alleles in rice and barley.

Authors:  Luis Barboza; Sigi Effgen; Carlos Alonso-Blanco; Rik Kooke; Joost J B Keurentjes; Maarten Koornneef; Rubén Alcázar
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-10       Impact factor: 11.205

3.  Using knockout mutants to reveal the growth costs of defensive traits.

Authors:  Tobias Züst; Bindu Joseph; Kentaro K Shimizu; Daniel J Kliebenstein; Lindsay A Turnbull
Journal:  Proc Biol Sci       Date:  2011-01-26       Impact factor: 5.349

4.  Selection for niche differentiation in plant communities increases biodiversity effects.

Authors:  Debra Zuppinger-Dingley; Bernhard Schmid; Jana S Petermann; Varuna Yadav; Gerlinde B De Deyn; Dan F B Flynn
Journal:  Nature       Date:  2014-10-15       Impact factor: 49.962

5.  Predicting the evolutionary dynamics of seasonal adaptation to novel climates in Arabidopsis thaliana.

Authors:  Alexandre Fournier-Level; Emily O Perry; Jonathan A Wang; Peter T Braun; Andrew Migneault; Martha D Cooper; C Jessica E Metcalf; Johanna Schmitt
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-02       Impact factor: 11.205

6.  Genomic regions in crop-wild hybrids of lettuce are affected differently in different environments: implications for crop breeding.

Authors:  Yorike Hartman; Danny A P Hooftman; Brigitte Uwimana; Clemens C M van de Wiel; Marinus J M Smulders; Richard G F Visser; Peter H van Tienderen
Journal:  Evol Appl       Date:  2012-02-23       Impact factor: 5.183

7.  Density-independent mortality and increasing plant diversity are associated with differentiation of Taraxacum officinale into r- and K-strategists.

Authors:  Annett Lipowsky; Christiane Roscher; Jens Schumacher; Bernhard Schmid
Journal:  PLoS One       Date:  2012-01-09       Impact factor: 3.240

8.  Relationship between reproductive allocation and relative abundance among 32 species of a Tibetan alpine meadow: effects of fertilization and grazing.

Authors:  Kechang Niu; Bernhard Schmid; Philippe Choler; Guozhen Du
Journal:  PLoS One       Date:  2012-04-19       Impact factor: 3.240

9.  How is epigenetics predicted to contribute to climate change adaptation? What evidence do we need?

Authors:  Katrina McGuigan; Ary A Hoffmann; Carla M Sgrò
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-04-19       Impact factor: 6.671

10.  Abiotic stress QTL in lettuce crop-wild hybrids: comparing greenhouse and field experiments.

Authors:  Yorike Hartman; Danny A P Hooftman; Brigitte Uwimana; M Eric Schranz; Clemens C M van de Wiel; Marinus J M Smulders; Richard G F Visser; Richard W Michelmore; Peter H van Tienderen
Journal:  Ecol Evol       Date:  2014-05-17       Impact factor: 2.912

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.