Literature DB >> 20947417

A rapid and simple isothermal nucleic acid amplification test for detection of herpes simplex virus types 1 and 2.

Hyun-Jin Kim1, Yanhong Tong, Wen Tang, Louisito Quimson, Vicki A Cope, Xiaojing Pan, Aurelie Motre, Richard Kong, Jian Hong, Debbie Kohn, Nancy S Miller, Melinda D Poulter, Huimin Kong, Yi-Wei Tang, Belinda Yen-Lieberman.   

Abstract

BACKGROUND: A simple and rapid IsoAmp HSV assay has been developed for qualitative detection of herpes simplex virus (HSV) types 1 and 2 from genital lesions. Sample preparation involved a simple dilution step and the diluted specimens were directly added to the device and amplified by isothermal helicase-dependent amplification (HDA). Amplification products were then detected by a DNA strip embedded in a disposable cassette without any instrument. The total test turn-around time is less than 1.5h from specimen processing to result reporting.
OBJECTIVES: To evaluate the analytical and clinical performance of the IsoAmp HSV assay as well as the robustness and reproducibility of the assay. STUDY
DESIGN: The analytical sensitivity of the IsoAmp HSV assay was determined using both HSV-1 and HSV-2. Clinical performance was evaluated using 135 frozen specimens collected from patients with suspected HSV infection in genital area.
RESULTS: The analytical sensitivity of the assays was 5.5 and 34.1 copies/reaction for HSV-1 and HSV-2 respectively with a 95% confidence interval. When the herpes viral culture was used as the reference standard, the clinical sensitivity and specificity of the IsoAmp HSV assay were 100.0% and 96.3% respectively. The inter-laboratory reproducibility achieved an overall 97.5% agreement by testing a total of 80 blinded HSV-1 samples among five laboratories.
CONCLUSION: Adequate analytical and clinical performance of the IsoAmp HSV assay was demonstrated. This assay is simple to perform and has acceptable inter-laboratory reproducibility.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20947417      PMCID: PMC3018672          DOI: 10.1016/j.jcv.2010.09.006

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


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