Literature DB >> 20888754

Higher throughput calorimetry: opportunities, approaches and challenges.

Francisco E Torres1, Michael I Recht, Joseph E Coyle, Richard H Bruce, Glyn Williams.   

Abstract

Higher throughput thermodynamic measurements can provide value in structure-based drug discovery during fragment screening, hit validation, and lead optimization. Enthalpy can be used to detect and characterize ligand binding, and changes that affect the interaction of protein and ligand can sometimes be detected more readily from changes in the enthalpy of binding than from the corresponding free-energy changes or from protein-ligand structures. Newer, higher throughput calorimeters are being incorporated into the drug discovery process. Improvements in titration calorimeters come from extensions of a mature technology and face limitations in scaling. Conversely, array calorimetry, an emerging technology, shows promise for substantial improvements in throughput and material utilization, but improved sensitivity is needed.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20888754      PMCID: PMC2989423          DOI: 10.1016/j.sbi.2010.09.001

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  32 in total

1.  Exact analysis of competition ligand binding by displacement isothermal titration calorimetry.

Authors:  B W Sigurskjold
Journal:  Anal Biochem       Date:  2000-01-15       Impact factor: 3.365

Review 2.  Isothermal titration calorimetry in drug discovery.

Authors:  W H Ward; G A Holdgate
Journal:  Prog Med Chem       Date:  2001

3.  Heat does not come in different colours: entropy-enthalpy compensation, free energy windows, quantum confinement, pressure perturbation calorimetry, solvation and the multiple causes of heat capacity effects in biomolecular interactions.

Authors:  A Cooper; C M Johnson; J H Lakey; M Nöllmann
Journal:  Biophys Chem       Date:  2001-11-28       Impact factor: 2.352

4.  An isothermal titration calorimetric method to determine the kinetic parameters of enzyme catalytic reaction by employing the product inhibition as probe.

Authors:  L Cai; A Cao; L Lai
Journal:  Anal Biochem       Date:  2001-12-01       Impact factor: 3.365

5.  On the value of c: can low affinity systems be studied by isothermal titration calorimetry?

Authors:  W Bruce Turnbull; Antonio H Daranas
Journal:  J Am Chem Soc       Date:  2003-12-03       Impact factor: 15.419

Review 6.  Approaches to the description and prediction of the binding affinity of small-molecule ligands to macromolecular receptors.

Authors:  Holger Gohlke; Gerhard Klebe
Journal:  Angew Chem Int Ed Engl       Date:  2002-08-02       Impact factor: 15.336

Review 7.  Thermodynamic rules for the design of high affinity HIV-1 protease inhibitors with adaptability to mutations and high selectivity towards unwanted targets.

Authors:  Hiroyasu Ohtaka; Salman Muzammil; Arne Schön; Adrian Velazquez-Campoy; Sonia Vega; Ernesto Freire
Journal:  Int J Biochem Cell Biol       Date:  2004-09       Impact factor: 5.085

8.  Calorimetric biosensors with integrated microfluidic channels.

Authors:  Yuyan Zhang; Srinivas Tadigadapa
Journal:  Biosens Bioelectron       Date:  2004-07-15       Impact factor: 10.618

9.  Ligand efficiency: a useful metric for lead selection.

Authors:  Andrew L Hopkins; Colin R Groom; Alexander Alex
Journal:  Drug Discov Today       Date:  2004-05-15       Impact factor: 7.851

10.  Fragment-based drug discovery applied to Hsp90. Discovery of two lead series with high ligand efficiency.

Authors:  Christopher W Murray; Maria G Carr; Owen Callaghan; Gianni Chessari; Miles Congreve; Suzanna Cowan; Joseph E Coyle; Robert Downham; Eva Figueroa; Martyn Frederickson; Brent Graham; Rachel McMenamin; M Alistair O'Brien; Sahil Patel; Theresa R Phillips; Glyn Williams; Andrew J Woodhead; Alison J-A Woolford
Journal:  J Med Chem       Date:  2010-08-26       Impact factor: 7.446

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  22 in total

1.  High-precision isothermal titration calorimetry with automated peak-shape analysis.

Authors:  Sandro Keller; Carolyn Vargas; Huaying Zhao; Grzegorz Piszczek; Chad A Brautigam; Peter Schuck
Journal:  Anal Chem       Date:  2012-05-14       Impact factor: 6.986

2.  Integration and global analysis of isothermal titration calorimetry data for studying macromolecular interactions.

Authors:  Chad A Brautigam; Huaying Zhao; Carolyn Vargas; Sandro Keller; Peter Schuck
Journal:  Nat Protoc       Date:  2016-04-07       Impact factor: 13.491

Review 3.  X-ray crystallography over the past decade for novel drug discovery - where are we heading next?

Authors:  Heping Zheng; Katarzyna B Handing; Matthew D Zimmerman; Ivan G Shabalin; Steven C Almo; Wladek Minor
Journal:  Expert Opin Drug Discov       Date:  2015-07-15       Impact factor: 6.098

4.  Extent of enthalpy-entropy compensation in protein-ligand interactions.

Authors:  Tjelvar S G Olsson; John E Ladbury; Will R Pitt; Mark A Williams
Journal:  Protein Sci       Date:  2011-08-02       Impact factor: 6.725

5.  Accelerating Post-SELEX Aptamer Engineering Using Exonuclease Digestion.

Authors:  Juan Canoura; Haixiang Yu; Obtin Alkhamis; Daniel Roncancio; Rifat Farhana; Yi Xiao
Journal:  J Am Chem Soc       Date:  2020-12-30       Impact factor: 15.419

Review 6.  Thermodynamic studies for drug design and screening.

Authors:  Nichola C Garbett; Jonathan B Chaires
Journal:  Expert Opin Drug Discov       Date:  2012-03-08       Impact factor: 6.098

7.  Optical calorimetry in microfluidic droplets.

Authors:  Jacob Chamoun; Ashish Pattekar; Farzaneh Afshinmanesh; Joerg Martini; Michael I Recht
Journal:  Lab Chip       Date:  2018-05-29       Impact factor: 6.799

8.  Melting thermodynamics of reversible DNA/ligand complexes at interfaces.

Authors:  Irina Belozerova; Rastislav Levicky
Journal:  J Am Chem Soc       Date:  2012-10-30       Impact factor: 15.419

9.  Towards an Automated MEMS-based Characterization of Benign and Cancerous Breast Tissue using Bioimpedance Measurements.

Authors:  Hardik J Pandya; Hyun Tae Kim; Rajarshi Roy; Wenjin Chen; Lei Cong; Hua Zhong; David J Foran; Jaydev P Desai
Journal:  Sens Actuators B Chem       Date:  2014-08-01       Impact factor: 7.460

Review 10.  Recent developments in the use of differential scanning fluorometry in protein and small molecule discovery and characterization.

Authors:  Anton Simeonov
Journal:  Expert Opin Drug Discov       Date:  2013-06-06       Impact factor: 6.098

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