Literature DB >> 11804727

Heat does not come in different colours: entropy-enthalpy compensation, free energy windows, quantum confinement, pressure perturbation calorimetry, solvation and the multiple causes of heat capacity effects in biomolecular interactions.

A Cooper1, C M Johnson, J H Lakey, M Nöllmann.   

Abstract

Modern techniques in microcalorimetry allow us to measure directly the heat changes and associated thermodynamics for biomolecular processes in aqueous solution at reasonable concentrations. All these processes involve changes in solvation/hydration, and it is natural to assume that the heats for these processes should reflect, in some way, such changes in solvation. However, the interpretation of data is still somewhat ambiguous, since different non-covalent interactions may have similar thermodynamic signatures, and analysis is frustrated by large entropy-enthalpy compensation effects. Changes in heat capacity (Delta C(p)) have been related to changes in hydrophobic hydration and non-polar accessible surface areas, but more recent empirical and theoretical work has shown how this need not always be the case. Entropy-enthalpy compensation is a natural consequence of finite Delta C(p) values and, more generally, can arise as a result of quantum confinement effects, multiple weak interactions, and limited free energy windows, giving rise to thermodynamic homeostasis that may be of evolutionary and functional advantage. The new technique of pressure perturbation calorimetry (PPC) has enormous potential here as a means of probing solvation-related volumetric changes in biomolecules at modest pressures, as illustrated with preliminary data for a simple protein-inhibitor complex.

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Year:  2001        PMID: 11804727     DOI: 10.1016/s0301-4622(01)00222-8

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  73 in total

1.  Thermodynamic analysis of the binding of component enzymes in the assembly of the pyruvate dehydrogenase multienzyme complex of Bacillus stearothermophilus.

Authors:  Hyo-Il Jung; Simon J Bowden; Alan Cooper; Richard N Perham
Journal:  Protein Sci       Date:  2002-05       Impact factor: 6.725

2.  Mapping glycoside hydrolase substrate subsites by isothermal titration calorimetry.

Authors:  Gennady Zolotnitsky; Uri Cogan; Noam Adir; Vered Solomon; Gil Shoham; Yuval Shoham
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-26       Impact factor: 11.205

Review 3.  Differential scanning calorimetry techniques: applications in biology and nanoscience.

Authors:  Pooria Gill; Tahereh Tohidi Moghadam; Bijan Ranjbar
Journal:  J Biomol Tech       Date:  2010-12

4.  Binding-linked protonation of a DNA minor-groove agent.

Authors:  Binh Nguyen; Jaroslav Stanek; W David Wilson
Journal:  Biophys J       Date:  2005-11-18       Impact factor: 4.033

5.  Crystal structure of the second LNS/LG domain from neurexin 1alpha: Ca2+ binding and the effects of alternative splicing.

Authors:  Lauren R Sheckler; Lisa Henry; Shuzo Sugita; Thomas C Südhof; Gabby Rudenko
Journal:  J Biol Chem       Date:  2006-06-13       Impact factor: 5.157

6.  Thermodynamic characterization of binding Oxytricha nova single strand telomere DNA with the alpha protein N-terminal domain.

Authors:  Pawel Buczek; Martin P Horvath
Journal:  J Mol Biol       Date:  2006-04-25       Impact factor: 5.469

Review 7.  Heat capacity changes associated with nucleic acid folding.

Authors:  Peter J Mikulecky; Andrew L Feig
Journal:  Biopolymers       Date:  2006-05       Impact factor: 2.505

8.  Heat capacity changes associated with DNA duplex formation: salt- and sequence-dependent effects.

Authors:  Peter J Mikulecky; Andrew L Feig
Journal:  Biochemistry       Date:  2006-01-17       Impact factor: 3.162

9.  Free energies of protein-protein association determined by electrospray ionization mass spectrometry correlate accurately with values obtained by solution methods.

Authors:  Sanjay R Krishnaswamy; Evan R Williams; Jack F Kirsch
Journal:  Protein Sci       Date:  2006-06       Impact factor: 6.725

10.  Using empirical phase diagrams to understand the role of intramolecular dynamics in immunoglobulin G stability.

Authors:  Joshua D Ramsey; Michelle L Gill; Tim J Kamerzell; E Shane Price; Sangeeta B Joshi; Steven M Bishop; Cynthia N Oliver; C Russell Middaugh
Journal:  J Pharm Sci       Date:  2009-07       Impact factor: 3.534

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