Literature DB >> 20879286

Model-free, regularized, fast, and robust analytical orientation distribution function estimation.

Jian Cheng1, Aurobrata Ghosh, Rachid Deriche, Tianzi Jiang.   

Abstract

High Angular Resolution Imaging (HARDI) can better explore the complex micro-structure of white matter compared to Diffusion Tensor Imaging (DTI). Orientation Distribution Function (ODF) in HARDI is used to describe the probability of the fiber direction. There are two type definitions of the ODF, which were respectively proposed in Q-Ball Imaging (QBI) and Diffusion Spectrum Imaging (DSI). Some analytical reconstructions methods have been proposed to estimate these two type of ODFs from single shell HARDI data. However they all have some assumptions and intrinsic modeling errors. In this article, we propose, almost without any assumption, a uniform analytical method to estimate these two ODFs from DWI signals in q space, which is based on Spherical Polar Fourier Expression (SPFE) of signals. The solution is analytical and is a linear transformation from the q-space signal to the ODF represented by Spherical Harmonics (SH). It can naturally combines the DWI signals in different Q-shells. Moreover It can avoid the intrinsic Funk-Radon Transform (FRT) blurring error in QBI and it does not need any assumption of the signals, such as the multiple tensor model and mono/multi-exponential decay. We validate our method using synthetic data, phantom data and real data. Our method works well in all experiments, especially for the data with low SNR, low anisotropy and non-exponential decay.

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Year:  2010        PMID: 20879286     DOI: 10.1007/978-3-642-15705-9_79

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  10 in total

1.  Single- and Multiple-Shell Uniform Sampling Schemes for Diffusion MRI Using Spherical Codes.

Authors:  Jian Cheng; Dinggang Shen; Pew-Thian Yap; Peter J Basser
Journal:  IEEE Trans Med Imaging       Date:  2017-09-25       Impact factor: 10.048

Review 2.  Diffusion magnetic resonance imaging for Brainnetome: a critical review.

Authors:  Nianming Zuo; Jian Cheng; Tianzi Jiang
Journal:  Neurosci Bull       Date:  2012-08       Impact factor: 5.203

3.  Regularized spherical polar fourier diffusion MRI with optimal dictionary learning.

Authors:  Jian Cheng; Tianzi Jiang; Rachid Deriche; Dinggang Shen; Pew-Thian Yap
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

4.  A 4D hyperspherical interpretation of q-space.

Authors:  A Pasha Hosseinbor; Moo K Chung; Yu-Chien Wu; Barbara B Bendlin; Andrew L Alexander
Journal:  Med Image Anal       Date:  2015-01-03       Impact factor: 8.545

5.  Design of multishell sampling schemes with uniform coverage in diffusion MRI.

Authors:  Emmanuel Caruyer; Christophe Lenglet; Guillermo Sapiro; Rachid Deriche
Journal:  Magn Reson Med       Date:  2013-04-26       Impact factor: 4.668

6.  Bessel Fourier Orientation Reconstruction (BFOR): an analytical diffusion propagator reconstruction for hybrid diffusion imaging and computation of q-space indices.

Authors:  A Pasha Hosseinbor; Moo K Chung; Yu-Chien Wu; Andrew L Alexander
Journal:  Neuroimage       Date:  2012-08-31       Impact factor: 6.556

7.  Evaluation of fiber tracking from subsampled q-space data in diffusion spectrum imaging.

Authors:  Getaneh Bayu Tefera; Yuxiang Zhou; Vaibhav Juneja; Ponnada A Narayana
Journal:  Magn Reson Imaging       Date:  2013-04-19       Impact factor: 2.546

8.  Non-Negative Spherical Deconvolution (NNSD) for estimation of fiber Orientation Distribution Function in single-/multi-shell diffusion MRI.

Authors:  Jian Cheng; Rachid Deriche; Tianzi Jiang; Dinggang Shen; Pew-Thian Yap
Journal:  Neuroimage       Date:  2014-08-07       Impact factor: 6.556

9.  How does B-value affect HARDI reconstruction using clinical diffusion MRI data?

Authors:  Sangma Xie; Nianming Zuo; Liqing Shang; Ming Song; Lingzhong Fan; Tianzi Jiang
Journal:  PLoS One       Date:  2015-03-24       Impact factor: 3.240

10.  Joint 6D k-q Space Compressed Sensing for Accelerated High Angular Resolution Diffusion MRI.

Authors:  Jian Cheng; Dinggang Shen; Peter J Basser; Pew-Thian Yap
Journal:  Inf Process Med Imaging       Date:  2015
  10 in total

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