Literature DB >> 20879221

Spatial decision forests for MS lesion segmentation in multi-channel MR images.

Ezequiel Geremia1, Bjoern H Menze, Olivier Clatz, Ender Konukoglu, Antonio Criminisi, Nicholas Ayache.   

Abstract

A new algorithm is presented for the automatic segmentation of Multiple Sclerosis (MS) lesions in 3D MR images. It builds on the discriminative random decision forest framework to provide a voxel-wise probabilistic classification of the volume. Our method uses multi-channel MIR intensities (T1, T2, Flair), spatial prior and long-range comparisons with 3D regions to discriminate lesions. A symmetry feature is introduced accounting for the fact that some MS lesions tend to develop in an asymmetric way. Quantitative evaluation of the data is carried out on publicly available labeled cases from the MS Lesion Segmentation Challenge 2008 dataset and demonstrates improved results over the state of the art.

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Year:  2010        PMID: 20879221     DOI: 10.1007/978-3-642-15705-9_14

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  11 in total

1.  Longitudinal multiple sclerosis lesion segmentation: Resource and challenge.

Authors:  Aaron Carass; Snehashis Roy; Amod Jog; Jennifer L Cuzzocreo; Elizabeth Magrath; Adrian Gherman; Julia Button; James Nguyen; Ferran Prados; Carole H Sudre; Manuel Jorge Cardoso; Niamh Cawley; Olga Ciccarelli; Claudia A M Wheeler-Kingshott; Sébastien Ourselin; Laurence Catanese; Hrishikesh Deshpande; Pierre Maurel; Olivier Commowick; Christian Barillot; Xavier Tomas-Fernandez; Simon K Warfield; Suthirth Vaidya; Abhijith Chunduru; Ramanathan Muthuganapathy; Ganapathy Krishnamurthi; Andrew Jesson; Tal Arbel; Oskar Maier; Heinz Handels; Leonardo O Iheme; Devrim Unay; Saurabh Jain; Diana M Sima; Dirk Smeets; Mohsen Ghafoorian; Bram Platel; Ariel Birenbaum; Hayit Greenspan; Pierre-Louis Bazin; Peter A Calabresi; Ciprian M Crainiceanu; Lotta M Ellingsen; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Neuroimage       Date:  2017-01-11       Impact factor: 6.556

2.  Deformable templates guided discriminative models for robust 3D brain MRI segmentation.

Authors:  Cheng-Yi Liu; Juan Eugenio Iglesias; Zhuowen Tu
Journal:  Neuroinformatics       Date:  2013-10

Review 3.  Segmentation of multiple sclerosis lesions in MR images: a review.

Authors:  Daryoush Mortazavi; Abbas Z Kouzani; Hamid Soltanian-Zadeh
Journal:  Neuroradiology       Date:  2011-05-17       Impact factor: 2.804

4.  Deep Learning and Texture-Based Semantic Label Fusion for Brain Tumor Segmentation.

Authors:  L Vidyaratne; M Alam; Z Shboul; K M Iftekharuddin
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-02-27

5.  Dynamics of tissue topology during cancer invasion and metastasis.

Authors:  Lance L Munn
Journal:  Phys Biol       Date:  2013-12-04       Impact factor: 2.583

6.  Deep-learning and radiomics ensemble classifier for false positive reduction in brain metastases segmentation.

Authors:  Zi Yang; Mingli Chen; Mahdieh Kazemimoghadam; Lin Ma; Strahinja Stojadinovic; Robert Timmerman; Tu Dan; Zabi Wardak; Weiguo Lu; Xuejun Gu
Journal:  Phys Med Biol       Date:  2022-01-19       Impact factor: 3.609

7.  Multi-Sectional Views Textural Based SVM for MS Lesion Segmentation in Multi-Channels MRIs.

Authors:  Bassem A Abdullah; Akmal A Younis; Nigel M John
Journal:  Open Biomed Eng J       Date:  2012-05-09

Review 8.  The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).

Authors:  Bjoern H Menze; Andras Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth Gerstner; Marc-André Weber; Tal Arbel; Brian B Avants; Nicholas Ayache; Patricia Buendia; D Louis Collins; Nicolas Cordier; Jason J Corso; Antonio Criminisi; Tilak Das; Hervé Delingette; Çağatay Demiralp; Christopher R Durst; Michel Dojat; Senan Doyle; Joana Festa; Florence Forbes; Ezequiel Geremia; Ben Glocker; Polina Golland; Xiaotao Guo; Andac Hamamci; Khan M Iftekharuddin; Raj Jena; Nigel M John; Ender Konukoglu; Danial Lashkari; José Antonió Mariz; Raphael Meier; Sérgio Pereira; Doina Precup; Stephen J Price; Tammy Riklin Raviv; Syed M S Reza; Michael Ryan; Duygu Sarikaya; Lawrence Schwartz; Hoo-Chang Shin; Jamie Shotton; Carlos A Silva; Nuno Sousa; Nagesh K Subbanna; Gabor Szekely; Thomas J Taylor; Owen M Thomas; Nicholas J Tustison; Gozde Unal; Flor Vasseur; Max Wintermark; Dong Hye Ye; Liang Zhao; Binsheng Zhao; Darko Zikic; Marcel Prastawa; Mauricio Reyes; Koen Van Leemput
Journal:  IEEE Trans Med Imaging       Date:  2014-12-04       Impact factor: 10.048

9.  PCG-cut: graph driven segmentation of the prostate central gland.

Authors:  Jan Egger
Journal:  PLoS One       Date:  2013-10-11       Impact factor: 3.240

10.  Medical Imaging Lesion Detection Based on Unified Gravitational Fuzzy Clustering.

Authors:  Jean Marie Vianney Kinani; Alberto Jorge Rosales Silva; Francisco Gallegos Funes; Dante Mújica Vargas; Eduardo Ramos Díaz; Alfonso Arellano
Journal:  J Healthc Eng       Date:  2017-10-12       Impact factor: 2.682

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