Literature DB >> 20879220

Automatic segmentation and components classification of optic pathway gliomas in MRI.

Lior Weizman1, Liat Ben-Sira, Leo Joskowicz, Ronit Precel, Shlomi Constantini, Dafna Ben-Bashat.   

Abstract

We present a new method for the automatic segmentation and components classification of brain Optic Pathway Gliomas (OPGs) from multi-spectral MRI datasets. Our method accurately identifies the sharp OPG boundaries and consistently delineates the missing contours by effectively incorporating prior location, shape, and intensity information. It then classifies the segmented OPG volume into its three main components--solid, enhancing, and cyst--with a probabilistic tumor tissue model generated from training datasets that accounts for the datasets grey-level differences. Experimental results on 25 datasets yield a mean OPG boundary surface distance error of 0.73mm and mean volume overlap difference of 30.6% as compared to manual segmentation by an expert radiologist. A follow-up patient study shows high correlation between the clinical tumor progression evaluation and the component classification results. To the best of our knowledge, ours is the first method for automatic OPG segmentation and component classification that may support quantitative disease progression and treatment efficacy evaluation.

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Year:  2010        PMID: 20879220     DOI: 10.1007/978-3-642-15705-9_13

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

1.  MRI internal segmentation of optic pathway gliomas: clinical implementation of a novel algorithm.

Authors:  Ben Shofty; Lior Weizman; Leo Joskowicz; Shlomi Constantini; Anat Kesler; Dafna Ben-Bashat; Michal Yalon; Rina Dvir; Sigal Freedman; Jonathan Roth; Liat Ben-Sira
Journal:  Childs Nerv Syst       Date:  2011-03-31       Impact factor: 1.475

2.  Patient-specific and global convolutional neural networks for robust automatic liver tumor delineation in follow-up CT studies.

Authors:  Refael Vivanti; Leo Joskowicz; Naama Lev-Cohain; Ariel Ephrat; Jacob Sosna
Journal:  Med Biol Eng Comput       Date:  2018-03-10       Impact factor: 2.602

3.  Computer-based radiological longitudinal evaluation of meningiomas following stereotactic radiosurgery.

Authors:  Eli Ben Shimol; Leo Joskowicz; Ruth Eliahou; Yigal Shoshan
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-10-14       Impact factor: 2.924

4.  Semiautomatic segmentation and follow-up of multicomponent low-grade tumors in longitudinal brain MRI studies.

Authors:  Lior Weizman; Liat Ben Sira; Leo Joskowicz; Daniel L Rubin; Kristen W Yeom; Shlomi Constantini; Ben Shofty; Dafna Ben Bashat
Journal:  Med Phys       Date:  2014-05       Impact factor: 4.071

5.  Automatic lung tumor segmentation with leaks removal in follow-up CT studies.

Authors:  R Vivanti; L Joskowicz; O A Karaaslan; J Sosna
Journal:  Int J Comput Assist Radiol Surg       Date:  2015-01-22       Impact factor: 2.924

6.  Predicting pediatric optic pathway glioma progression using advanced magnetic resonance image analysis and machine learning.

Authors:  Jared M Pisapia; Hamed Akbari; Martin Rozycki; Jayesh P Thawani; Phillip B Storm; Robert A Avery; Arastoo Vossough; Michael J Fisher; Gregory G Heuer; Christos Davatzikos
Journal:  Neurooncol Adv       Date:  2020-08-01

7.  Automatic detection of new tumors and tumor burden evaluation in longitudinal liver CT scan studies.

Authors:  R Vivanti; A Szeskin; N Lev-Cohain; J Sosna; L Joskowicz
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-08-30       Impact factor: 2.924

  7 in total

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