| Literature DB >> 32885166 |
Jared M Pisapia1,2, Hamed Akbari2, Martin Rozycki2, Jayesh P Thawani3, Phillip B Storm4, Robert A Avery5, Arastoo Vossough6, Michael J Fisher7, Gregory G Heuer4, Christos Davatzikos2.
Abstract
BACKGROUND: Optic pathway gliomas (OPGs) are low-grade tumors of the white matter of the visual system with a highly variable clinical course. The aim of the study was to generate a magnetic resonance imaging (MRI)-based predictive model of OPG tumor progression using advanced image analysis and machine learning techniques.Entities:
Keywords: diffusion-weighted imaging; machine learning; magnetic resonance imaging; optic pathway glioma; vision decline
Year: 2020 PMID: 32885166 PMCID: PMC7455885 DOI: 10.1093/noajnl/vdaa090
Source DB: PubMed Journal: Neurooncol Adv ISSN: 2632-2498
Figure 1.Study schema. Cases and controls were followed by surveillance MRI (represented by multiple downward nonbolded arrows) over time. Among cases, a progression scan is identified (bold downward arrow). The 3 preceding MRIs are included in the analysis (represented by the rectangle) when available. Two preceding MRIs are shown in the diagram for simplicity. For the static study, the 3 studies included in the rectangles are included for analysis. Dynamic study 1 also included changes in variables between scans (represented by brackets X and Y), whereas dynamic study 2 includes changes in variables over time between all combinations of studies (includes bracket Z). MRI, magnetic resonance imaging.
Figure 2.Diffusion tensor imaging of the optic radiations. Using the software Diffusion Toolkit, regions of interest (ROIs) are drawn to include the start (ROI A) and end (ROI B) points of the optic radiations (A). ROI C includes regions not within the occipital lobe (B). By selected tracts between ROA A and ROI B and NOT ROI C, diffusion tensors of the optic radiations are generated (C).
Figure 3.Optic nerve and optic radiation multimodality MRI analysis. After manual defining the optic nerves and generating diffusion tensors for the optic radiations (A), these regions are segmented (B). The segmented regions were then overlaid on all anatomic sequences and DTI sequences, including T1, T1-CE, T2, T2-FLAIR, FA, RAD, and TR through a process of registration (C and D). The distribution of intensities within these regions, as well as minimum, maximum, mean, and standard deviation of values, on all MRI modalities was obtained (feature extraction). These features, or variables, for all patients, served as input for the machine learning algorithm (E). DTI, diffusion tensor imaging; FA, fractional anisotropy; MRI, magnetic resonance imaging; RAD, radial diffusivity; T1-CE, T1-contrast enhanced; T2-FLAIR, T2-fluid-attenuated inversion recovery; TR, trace.
Baseline Patient and Imaging Characteristics
| Cases | Controls | |
|---|---|---|
| No. | 19 | 19 |
| Sex (F), No. (%) | 7 (37%) | 11 (58%) |
| NF1 status, No. (%) | 17 (89%) | 19 (100%) |
| Mean age at most recently analyzed MRI (SD) (years)* | 5.1 (2.7) | 8.8 (3.2) |
| Mean time from diagnosis to progression (SD) (years) | 2.2 (1.9) | NA |
| Mean time between most recent follow-up and most recently analyzed MRIs (SD) (years) | NA | 3.5 (1.7) |
| Posterior-most tumor location, No. (%) | ||
| Optic nerves | 9 (47%) | 11 (58%) |
| Optic chiasm | 5 (26%) | 7 (37%) |
| Optic tract/radiations | 5 (26%) | 1 (5%) |
Cases refer to patients with radiographic progression and/or visual decline, and controls refer to patients without progression during the follow-up period. “Progression” MRI and “nonprogression” MRIs refer to those MRI studies among cases in which the MRI was or was not obtained at the time of progression. F, female; MRI, magnetic resonance imaging; NA, not applicable; NF1, Neurofibromatosis 1; No., number; SD, standard deviation.
*There was no statistically significant difference between all variables, except for a higher mean age at time of most recently analyzed MRI for controls (P < .01).
Performance Metrics of MRI-Based Predictive Models
| Static study | Dynamic study 1 | Dynamic study 2 | |
|---|---|---|---|
| No. MRI studies (time points) | 83 | 43 | 62 |
| No. of features | 268 | 532 | 532 |
| Accuracy | 83% | 82% | 86% |
| AUC | 0.88 | 0.87 | 0.92 |
| Sensitivity | 81% | 82% | 89% |
| Specificity | 85% | 80% | 81% |
Static study refers to the model created by inclusion of all imaging studies. Dynamic study 1 includes changes in variables over time between sequential scans, and dynamic study 2 includes changes in variables over time between all pairwise combinations of scans. AUC, area under the curve; MRI, magnetic resonance imaging; No., number.
Figure 4.Receiver operating characteristics (ROC) analyses. The ROC curves for the static (A), dynamic 1 (B), and dynamic 2 (C) studies shows sensitivity on the y-axis versus 1 − specificity on the x-axis. The red dot is the shortest distance from the top left point (0,1) to the ROC curve and represents the optimal threshold. The diagonal is equivalent to chance. Accuracy was determined by leave-two-out cross-validation.