Literature DB >> 20867209

Implementation of dynamic Bayesian decision making by intracellular kinetics.

Tetsuya J Kobayashi1.   

Abstract

Decision making in a noisy and dynamically changing environment is a fundamental task for a cell. To choose appropriate decisions over time, a cell must be equipped with intracellular kinetics that can conduct dynamic and efficient decision making. By using the theory of sequential inference, I demonstrate that dynamic Bayesian decision making can be implemented by an intracellular kinetics with a dual positive feedback structure. I also show that the combination of linear instantaneous and nonlinear stationary sensitivities to the input dominantly contributes to decision making efficiency, and that the state-dependent sensitivity change further suppresses noisy response. The statistical principles underlying these two factors are further clarified to be a log-likelihood-dependent quantification of the input information and uncertainty-dependent sensitivity control.

Mesh:

Year:  2010        PMID: 20867209     DOI: 10.1103/PhysRevLett.104.228104

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  9 in total

1.  Decisions on the fly in cellular sensory systems.

Authors:  Eric D Siggia; Massimo Vergassola
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-09       Impact factor: 11.205

2.  Molecular circuits for dynamic noise filtering.

Authors:  Christoph Zechner; Georg Seelig; Marc Rullan; Mustafa Khammash
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-12       Impact factor: 11.205

3.  Information processing and integration with intracellular dynamics near critical point.

Authors:  Atsushi Kamimura; Tetsuya J Kobayashi
Journal:  Front Physiol       Date:  2012-06-13       Impact factor: 4.566

4.  Environmental statistics and optimal regulation.

Authors:  David A Sivak; Matt Thomson
Journal:  PLoS Comput Biol       Date:  2014-09-25       Impact factor: 4.475

5.  Probabilistic adaptation in changing microbial environments.

Authors:  Yarden Katz; Michael Springer
Journal:  PeerJ       Date:  2016-12-14       Impact factor: 2.984

6.  How a well-adapting immune system remembers.

Authors:  Andreas Mayer; Vijay Balasubramanian; Aleksandra M Walczak; Thierry Mora
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-15       Impact factor: 11.205

7.  A least microenvironmental uncertainty principle (LEUP) as a generative model of collective cell migration mechanisms.

Authors:  Arnab Barua; Josue M Nava-Sedeño; Michael Meyer-Hermann; Haralampos Hatzikirou
Journal:  Sci Rep       Date:  2020-12-22       Impact factor: 4.379

Review 8.  Experimental and theoretical bases for mechanisms of antigen discrimination by T cells.

Authors:  Masashi K Kajita; Ryo Yokota; Kazuyuki Aihara; Tetsuya J Kobayashi
Journal:  Biophysics (Nagoya-shi)       Date:  2015-03-26

9.  The fidelity of dynamic signaling by noisy biomolecular networks.

Authors:  Clive G Bowsher; Margaritis Voliotis; Peter S Swain
Journal:  PLoS Comput Biol       Date:  2013-03-28       Impact factor: 4.475

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.