Literature DB >> 20867179

Cryptotomography: reconstructing 3D Fourier intensities from randomly oriented single-shot diffraction patterns.

N D Loh1, M J Bogan, V Elser, A Barty, S Boutet, S Bajt, J Hajdu, T Ekeberg, F R N C Maia, J Schulz, M M Seibert, B Iwan, N Timneanu, S Marchesini, I Schlichting, R L Shoeman, L Lomb, M Frank, M Liang, H N Chapman.   

Abstract

We reconstructed the 3D Fourier intensity distribution of monodisperse prolate nanoparticles using single-shot 2D coherent diffraction patterns collected at DESY's FLASH facility when a bright, coherent, ultrafast x-ray pulse intercepted individual particles of random, unmeasured orientations. This first experimental demonstration of cryptotomography extended the expansion-maximization-compression framework to accommodate unmeasured fluctuations in photon fluence and loss of data due to saturation or background scatter. This work is an important step towards realizing single-shot diffraction imaging of single biomolecules.

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Year:  2010        PMID： 20867179     DOI： 10.1103/PhysRevLett.104.225501

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN： 0031-9007            Impact factor:   9.161


  21 in total

1.  Conformational landscape of a virus by single-particle X-ray scattering.

Authors:  Ahmad Hosseinizadeh; Ghoncheh Mashayekhi; Jeremy Copperman; Peter Schwander; Ali Dashti; Reyhaneh Sepehr; Russell Fung; Marius Schmidt; Chun Hong Yoon; Brenda G Hogue; Garth J Williams; Andrew Aquila; Abbas Ourmazd
Journal:  Nat Methods       Date:  2017-08-14       Impact factor: 28.547

2.  Single-particle structure determination by correlations of snapshot X-ray diffraction patterns.

Authors:  D Starodub; A Aquila; S Bajt; M Barthelmess; A Barty; C Bostedt; J D Bozek; N Coppola; R B Doak; S W Epp; B Erk; L Foucar; L Gumprecht; C Y Hampton; A Hartmann; R Hartmann; P Holl; S Kassemeyer; N Kimmel; H Laksmono; M Liang; N D Loh; L Lomb; A V Martin; K Nass; C Reich; D Rolles; B Rudek; A Rudenko; J Schulz; R L Shoeman; R G Sierra; H Soltau; J Steinbrener; F Stellato; S Stern; G Weidenspointner; M Frank; J Ullrich; L Strüder; I Schlichting; H N Chapman; J C H Spence; M J Bogan
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

3.  Two-dimensional structure from random multiparticle X-ray scattering images using cross-correlations.

Authors:  B Pedrini; A Menzel; M Guizar-Sicairos; V A Guzenko; S Gorelick; C David; B D Patterson; R Abela
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

4.  Real-Space x-ray tomographic reconstruction of randomly oriented objects with sparse data frames.

Authors:  Kartik Ayyer; Hugh T Philipp; Mark W Tate; Veit Elser; Sol M Gruner
Journal:  Opt Express       Date:  2014-02-10       Impact factor: 3.894

Review 5.  A minimal view of single-particle imaging with X-ray lasers.

Authors:  N Duane Loh
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-07-17       Impact factor: 6.237

6.  The correlation of single-particle diffraction patterns as a continuous function of particle orientation.

Authors:  Andrew V Martin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-07-17       Impact factor: 6.237

Review 7.  Methods and application of coherent X-ray diffraction imaging of noncrystalline particles.

Authors:  Masayoshi Nakasako; Amane Kobayashi; Yuki Takayama; Kenta Asakura; Mao Oide; Koji Okajima; Tomotaka Oroguchi; Masaki Yamamoto
Journal:  Biophys Rev       Date:  2020-03-16

Review 8.  Emerging opportunities in structural biology with X-ray free-electron lasers.

Authors:  Ilme Schlichting; Jianwei Miao
Journal:  Curr Opin Struct Biol       Date:  2012-08-22       Impact factor: 6.809

9.  Solving structure with sparse, randomly-oriented x-ray data.

Authors:  Hugh T Philipp; Kartik Ayyer; Mark W Tate; Veit Elser; Sol M Gruner
Journal:  Opt Express       Date:  2012-06-04       Impact factor: 3.894

10.  Correlations in Scattered X-Ray Laser Pulses Reveal Nanoscale Structural Features of Viruses.

Authors:  Ruslan P Kurta; Jeffrey J Donatelli; Chun Hong Yoon; Peter Berntsen; Johan Bielecki; Benedikt J Daurer; Hasan DeMirci; Petra Fromme; Max Felix Hantke; Filipe R N C Maia; Anna Munke; Carl Nettelblad; Kanupriya Pande; Hemanth K N Reddy; Jonas A Sellberg; Raymond G Sierra; Martin Svenda; Gijs van der Schot; Ivan A Vartanyants; Garth J Williams; P Lourdu Xavier; Andrew Aquila; Peter H Zwart; Adrian P Mancuso
Journal:  Phys Rev Lett       Date:  2017-10-12       Impact factor: 9.161
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