Literature DB >> 20855583

Hydration dynamics at fluorinated protein surfaces.

Oh-Hoon Kwon1, Tae Hyeon Yoo, Christina M Othon, James A Van Deventer, David A Tirrell, Ahmed H Zewail.   

Abstract

Water-protein interactions dictate many processes crucial to protein function including folding, dynamics, interactions with other biomolecules, and enzymatic catalysis. Here we examine the effect of surface fluorination on water-protein interactions. Modification of designed coiled-coil proteins by incorporation of 5,5,5-trifluoroleucine or (4S)-2-amino-4-methylhexanoic acid enables systematic examination of the effects of side-chain volume and fluorination on solvation dynamics. Using ultrafast fluorescence spectroscopy, we find that fluorinated side chains exert electrostatic drag on neighboring water molecules, slowing water motion at the protein surface.

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Year:  2010        PMID: 20855583      PMCID: PMC2951393          DOI: 10.1073/pnas.1011569107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  49 in total

1.  Is the first hydration shell of lysozyme of higher density than bulk water?

Authors:  Franci Merzel; Jeremy C Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

2.  Fluorinated Coiled-Coil Proteins Prepared In Vivo Display Enhanced Thermal and Chemical Stability This work was supported by a grant from the U.S. Army Research Office. Y. Tang is supported by a Whitaker Graduate Research Fellowship. We thank Dr. Gary Hathaway for performing matrix-assisted laser desorption/ionization analyses.

Authors:  Yi Tang; Giovanna Ghirlanda; Wendy A. Petka; Tadashi Nakajima; William F. DeGrado; David A. Tirrell
Journal:  Angew Chem Int Ed Engl       Date:  2001-04-17       Impact factor: 15.336

Review 3.  Organic fluorine: odd man out.

Authors:  Jack D Dunitz
Journal:  Chembiochem       Date:  2004-05-03       Impact factor: 3.164

Review 4.  The polar hydrophobicity of fluorinated compounds.

Authors:  Justin C Biffinger; Hong Woo Kim; Stephen G DiMagno
Journal:  Chembiochem       Date:  2004-05-03       Impact factor: 3.164

Review 5.  Dynamics of water in biological recognition.

Authors:  Samir Kumar Pal; Ahmed H Zewail
Journal:  Chem Rev       Date:  2004-04       Impact factor: 60.622

6.  Evolving proteins of novel composition.

Authors:  Jin Kim Montclare; David A Tirrell
Journal:  Angew Chem Int Ed Engl       Date:  2006-07-03       Impact factor: 15.336

Review 7.  Bioorthogonal noncovalent chemistry: Fluorous phases in chemical biology.

Authors:  Nicholas C Yoder; Deniz Yüksel; Laila Dafik; Krishna Kumar
Journal:  Curr Opin Chem Biol       Date:  2006-10-19       Impact factor: 8.822

8.  Determination of the secondary structures of proteins by circular dichroism and optical rotatory dispersion.

Authors:  Y H Chen; J T Yang; H M Martinez
Journal:  Biochemistry       Date:  1972-10-24       Impact factor: 3.162

9.  Quasi-static self-quenching of Trp-X and X-Trp dipeptides in water: ultrafast fluorescence decay.

Authors:  Jianhua Xu; Jay R Knutson
Journal:  J Phys Chem B       Date:  2009-09-03       Impact factor: 2.991

10.  Biosynthesis and stability of coiled-coil peptides containing (2S,4R)-5,5,5-trifluoroleucine and (2S,4S)-5,5,5-trifluoroleucine.

Authors:  Jin Kim Montclare; Soojin Son; Ginevra A Clark; Krishna Kumar; David A Tirrell
Journal:  Chembiochem       Date:  2009-01-05       Impact factor: 3.164

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  10 in total

1.  A Robust and Quantitative Reporter System To Evaluate Noncanonical Amino Acid Incorporation in Yeast.

Authors:  Jessica T Stieglitz; Haixing P Kehoe; Ming Lei; James A Van Deventer
Journal:  ACS Synth Biol       Date:  2018-09-04       Impact factor: 5.110

2.  A platform for constructing, evaluating, and screening bioconjugates on the yeast surface.

Authors:  James A Van Deventer; Doris N Le; Jessie Zhao; Haixing P Kehoe; Ryan L Kelly
Journal:  Protein Eng Des Sel       Date:  2016-11-01       Impact factor: 1.650

3.  Enhanced vibrational solvatochromism and spectral diffusion by electron rich substituents on small molecule silanes.

Authors:  Courtney M Olson; Adam Grofe; Christopher J Huber; Ivan C Spector; Jiali Gao; Aaron M Massari
Journal:  J Chem Phys       Date:  2017-09-28       Impact factor: 3.488

4.  Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the "hydrophobic wall" of carbonic anhydrase.

Authors:  Jasmin Mecinović; Phillip W Snyder; Katherine A Mirica; Serena Bai; Eric T Mack; Richard L Kwant; Demetri T Moustakas; Annie Héroux; George M Whitesides
Journal:  J Am Chem Soc       Date:  2011-08-15       Impact factor: 15.419

5.  Homoisoleucine: a translationally active leucine surrogate of expanded hydrophobic surface area.

Authors:  James A Van Deventer; John D Fisk; David A Tirrell
Journal:  Chembiochem       Date:  2011-02-15       Impact factor: 3.164

6.  An ultrahigh affinity d-peptide antagonist Of MDM2.

Authors:  Changyou Zhan; Le Zhao; Xiaoli Wei; Xueji Wu; Xishan Chen; Weirong Yuan; Wei-Yue Lu; Marzena Pazgier; Wuyuan Lu
Journal:  J Med Chem       Date:  2012-06-22       Impact factor: 7.446

7.  Picosecond-resolved fluorescence studies of substrate and cofactor-binding domain mutants in a thermophilic alcohol dehydrogenase uncover an extended network of communication.

Authors:  Corey W Meadows; Jonathan E Tsang; Judith P Klinman
Journal:  J Am Chem Soc       Date:  2014-10-14       Impact factor: 15.419

8.  Reconciling mediating and slaving roles of water in protein conformational dynamics.

Authors:  Li Zhao; Wenzhao Li; Pu Tian
Journal:  PLoS One       Date:  2013-04-11       Impact factor: 3.240

9.  Picosecond-resolved fluorescent probes at functionally distinct tryptophans within a thermophilic alcohol dehydrogenase: relationship of temperature-dependent changes in fluorescence to catalysis.

Authors:  Corey W Meadows; Ryan Ou; Judith P Klinman
Journal:  J Phys Chem B       Date:  2014-06-03       Impact factor: 2.991

10.  Fluorine teams up with water to restore inhibitor activity to mutant BPTI.

Authors:  Shijie Ye; Bernhard Loll; Allison Ann Berger; Ulrike Mülow; Claudia Alings; Markus Christian Wahl; Beate Koksch
Journal:  Chem Sci       Date:  2015-06-12       Impact factor: 9.825

  10 in total

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