Literature DB >> 20853009

Development of an efficient gene targeting system in Colletotrichum higginsianum using a non-homologous end-joining mutant and Agrobacterium tumefaciens-mediated gene transfer.

Takuma Ushimaru1, Hiroshi Terada, Kie Tsuboi, Yuki Kogou, Ayumu Sakaguchi, Gento Tsuji, Yasuyuki Kubo.   

Abstract

The hemibiotrophic ascomycete Colletotrichum higginsianum is the casual agent of anthracnose disease of cruciferous plants. High efficiency transformation by Agrobacterium tumefaciens-mediated gene transfer has been established for this fungus. However, targeted gene mutagenesis through homologous recombination rarely occurs in C. higginsianum. We have identified and disrupted the C. higginsianum homologue of the human Ku70 gene, ChKU70, which encodes a protein that plays a role in non-homologous end-joining for repair of DNA breaks. chku70 mutants showed a dramatic increase in the frequency of integration of introduced exogenous DNA fragments by homologous recombination without any detectable phenotypic defects. This result demonstrates that the chku70 mutant is an efficient recipient for targeted gene mutagenesis in C. higginsianum. We have also developed a novel approach [named direct repeat recombination-mediated gene targeting (DRGT)] for targeted gene disruption through Agrobacterium tumefaciens-mediated gene transfer. DRGT utilizes homologous recombination between repeated sequences on the T-DNA flanking a partial fragment of the target gene. Our results suggest that DRGT in the chku70 mutant background could be a useful tool for rapid isolation of targeted gene disruptants in C. higginsianum.

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Year:  2010        PMID: 20853009     DOI: 10.1007/s00438-010-0572-1

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  40 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-26       Impact factor: 11.205

Review 2.  Approaches to functional genomics in filamentous fungi.

Authors:  Richard J Weld; Kim M Plummer; Margaret A Carpenter; Hayley J Ridgway
Journal:  Cell Res       Date:  2006-01       Impact factor: 25.617

3.  Highly efficient generation of signal transduction knockout mutants using a fungal strain deficient in the mammalian ku70 ortholog.

Authors:  Stefanie Pöggeler; Ulrich Kück
Journal:  Gene       Date:  2006-04-30       Impact factor: 3.688

Review 4.  DNA end-joining: from yeast to man.

Authors:  S E Critchlow; S P Jackson
Journal:  Trends Biochem Sci       Date:  1998-10       Impact factor: 13.807

Review 5.  Agrobacterium-mediated transformation as a tool for functional genomics in fungi.

Authors:  Caroline B Michielse; Paul J J Hooykaas; Cees A M J J van den Hondel; Arthur F J Ram
Journal:  Curr Genet       Date:  2005-05-12       Impact factor: 3.886

6.  A versatile and efficient gene-targeting system for Aspergillus nidulans.

Authors:  Tania Nayak; Edyta Szewczyk; C Elizabeth Oakley; Aysha Osmani; Leena Ukil; Sandra L Murray; Michael J Hynes; Stephen A Osmani; Berl R Oakley
Journal:  Genetics       Date:  2005-12-30       Impact factor: 4.562

7.  Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe.

Authors:  J Bähler; J Q Wu; M S Longtine; N G Shah; A McKenzie; A B Steever; A Wach; P Philippsen; J R Pringle
Journal:  Yeast       Date:  1998-07       Impact factor: 3.239

8.  Structural analysis of PKS1, a polyketide synthase gene involved in melanin biosynthesis in Colletotrichum lagenarium.

Authors:  Y Takano; Y Kubo; K Shimizu; K Mise; T Okuno; I Furusawa
Journal:  Mol Gen Genet       Date:  1995-11-15

9.  The Colletotrichum orbiculare SSD1 mutant enhances Nicotiana benthamiana basal resistance by activating a mitogen-activated protein kinase pathway.

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Journal:  Plant Cell       Date:  2009-08-25       Impact factor: 11.277

10.  Trans-kingdom T-DNA transfer from Agrobacterium tumefaciens to Saccharomyces cerevisiae.

Authors:  P Bundock; A den Dulk-Ras; A Beijersbergen; P J Hooykaas
Journal:  EMBO J       Date:  1995-07-03       Impact factor: 11.598

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  12 in total

1.  A ku70 null mutant improves gene targeting frequency in the fungal pathogen Verticillium dahliae.

Authors:  Xiliang Qi; Xiaofeng Su; Huiming Guo; Juncang Qi; Hongmei Cheng
Journal:  World J Microbiol Biotechnol       Date:  2015-12       Impact factor: 3.312

2.  Bidirectional-genetics platform, a dual-purpose mutagenesis strategy for filamentous fungi.

Authors:  Jaejin Park; Yong-Hwan Lee
Journal:  Eukaryot Cell       Date:  2013-09-20

3.  The Colletotrichum destructivum species complex - hemibiotrophic pathogens of forage and field crops.

Authors:  U Damm; R J O'Connell; J Z Groenewald; P W Crous
Journal:  Stud Mycol       Date:  2014-09       Impact factor: 16.097

4.  Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses.

Authors:  Richard J O'Connell; Michael R Thon; Stéphane Hacquard; Stefan G Amyotte; Jochen Kleemann; Maria F Torres; Ulrike Damm; Ester A Buiate; Lynn Epstein; Noam Alkan; Janine Altmüller; Lucia Alvarado-Balderrama; Christopher A Bauser; Christian Becker; Bruce W Birren; Zehua Chen; Jaeyoung Choi; Jo Anne Crouch; Jonathan P Duvick; Mark A Farman; Pamela Gan; David Heiman; Bernard Henrissat; Richard J Howard; Mehdi Kabbage; Christian Koch; Barbara Kracher; Yasuyuki Kubo; Audrey D Law; Marc-Henri Lebrun; Yong-Hwan Lee; Itay Miyara; Neil Moore; Ulla Neumann; Karl Nordström; Daniel G Panaccione; Ralph Panstruga; Michael Place; Robert H Proctor; Dov Prusky; Gabriel Rech; Richard Reinhardt; Jeffrey A Rollins; Steve Rounsley; Christopher L Schardl; David C Schwartz; Narmada Shenoy; Ken Shirasu; Usha R Sikhakolli; Kurt Stüber; Serenella A Sukno; James A Sweigard; Yoshitaka Takano; Hiroyuki Takahara; Frances Trail; H Charlotte van der Does; Lars M Voll; Isa Will; Sarah Young; Qiandong Zeng; Jingze Zhang; Shiguo Zhou; Martin B Dickman; Paul Schulze-Lefert; Emiel Ver Loren van Themaat; Li-Jun Ma; Lisa J Vaillancourt
Journal:  Nat Genet       Date:  2012-08-12       Impact factor: 38.330

5.  Characterization of a fungal thioesterase having Claisen cyclase and deacetylase activities in melanin biosynthesis.

Authors:  Anna L Vagstad; Eric A Hill; Jason W Labonte; Craig A Townsend
Journal:  Chem Biol       Date:  2012-12-21

6.  Biallelic Gene Targeting in Rice.

Authors:  Masaki Endo; Masafumi Mikami; Seiichi Toki
Journal:  Plant Physiol       Date:  2015-12-14       Impact factor: 8.340

7.  Improved Gene Targeting through Cell Cycle Synchronization.

Authors:  Vasiliki Tsakraklides; Elena Brevnova; Gregory Stephanopoulos; A Joe Shaw
Journal:  PLoS One       Date:  2015-07-20       Impact factor: 3.240

8.  A Genetic Screen for Pathogenicity Genes in the Hemibiotrophic Fungus Colletotrichum higginsianum Identifies the Plasma Membrane Proton Pump Pma2 Required for Host Penetration.

Authors:  Martin Korn; Johannes Schmidpeter; Marlis Dahl; Susanne Müller; Lars M Voll; Christian Koch
Journal:  PLoS One       Date:  2015-05-19       Impact factor: 3.240

9.  Colletotrichum higginsianum Mitogen-Activated Protein Kinase ChMK1: Role in Growth, Cell Wall Integrity, Colony Melanization, and Pathogenicity.

Authors:  Wei Wei; Ying Xiong; Wenjun Zhu; Nancong Wang; Guogen Yang; Fang Peng
Journal:  Front Microbiol       Date:  2016-08-03       Impact factor: 5.640

10.  ChMob2 binds to ChCbk1 and promotes virulence and conidiation of the fungal pathogen Colletotrichum higginsianum.

Authors:  Johannes Schmidpeter; Marlis Dahl; Jörg Hofmann; Christian Koch
Journal:  BMC Microbiol       Date:  2017-01-19       Impact factor: 3.605

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