Literature DB >> 20852609

A systematic approach to protein glycosylation analysis: a path through the maze.

Karina Mariño1, Jonathan Bones, Jayesh J Kattla, Pauline M Rudd.   

Abstract

Protein glycosylation is an important post-translational modification. It is a feature that enhances the functional diversity of proteins and influences their biological activity. A wide range of functions for glycans have been described, from structural roles to participation in molecular trafficking, self-recognition and clearance. Understanding the basis of these functions is challenging because the biosynthetic machinery that constructs glycans executes sequential and competitive steps that result in a mixture of glycosylated variants (glycoforms) for each glycoprotein. Additionally, naturally occurring glycoproteins are often present at low levels, putting pressure on the sensitivity of the analytical technologies. No universal method for the rapid and reliable identification of glycan structure is currently available; hence, research goals must dictate the best method or combination of methods. To this end, we introduce some of the major technologies routinely used for structural N- and O-glycan analysis, describing the complementary information that each provides.

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Year:  2010        PMID: 20852609     DOI: 10.1038/nchembio.437

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  86 in total

Review 1.  Protein glycosylation: nature, distribution, enzymatic formation, and disease implications of glycopeptide bonds.

Authors:  Robert G Spiro
Journal:  Glycobiology       Date:  2002-04       Impact factor: 4.313

2.  Ultra-small-sample molecular structure detection using microslot waveguide nuclear spin resonance.

Authors:  Yael Maguire; Isaac L Chuang; Shuguang Zhang; Neil Gershenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-15       Impact factor: 11.205

Review 3.  Optimal and consistent protein glycosylation in mammalian cell culture.

Authors:  Patrick Hossler; Sarwat F Khattak; Zheng Jian Li
Journal:  Glycobiology       Date:  2009-06-03       Impact factor: 4.313

Review 4.  Chemical approaches to glycobiology.

Authors:  Laura L Kiessling; Rebecca A Splain
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

Review 5.  The impact of glycosylation on the biological function and structure of human immunoglobulins.

Authors:  James N Arnold; Mark R Wormald; Robert B Sim; Pauline M Rudd; Raymond A Dwek
Journal:  Annu Rev Immunol       Date:  2007       Impact factor: 28.527

6.  Electron capture dissociation of oligosaccharides ionized with alkali, alkaline Earth, and transition metals.

Authors:  Julie T Adamson; Kristina Håkansson
Journal:  Anal Chem       Date:  2007-03-01       Impact factor: 6.986

7.  Detailed structural analysis of N-glycans released from glycoproteins in SDS-PAGE gel bands using HPLC combined with exoglycosidase array digestions.

Authors:  Louise Royle; Catherine M Radcliffe; Raymond A Dwek; Pauline M Rudd
Journal:  Methods Mol Biol       Date:  2006

8.  Structural characterization of the primary O-antigenic polysaccharide of the Rhizobium leguminosarum 3841 lipopolysaccharide and identification of a new 3-acetimidoylamino-3-deoxyhexuronic acid glycosyl component: a unique O-methylated glycan of uniform size, containing 6-deoxy-3-O-methyl-D-talose, n-acetylquinovosamine, and rhizoaminuronic acid (3-acetimidoylamino-3-deoxy-D-gluco-hexuronic acid).

Authors:  L Scott Forsberg; Russell W Carlson
Journal:  J Biol Chem       Date:  2008-04-02       Impact factor: 5.157

9.  Variability, heritability and environmental determinants of human plasma N-glycome.

Authors:  Ana Knezević; Ozren Polasek; Olga Gornik; Igor Rudan; Harry Campbell; Caroline Hayward; Alan Wright; Ivana Kolcic; Niaobh O'Donoghue; Jonathan Bones; Pauline M Rudd; Gordan Lauc
Journal:  J Proteome Res       Date:  2009-02       Impact factor: 4.466

10.  Meningococcal pilin: a glycoprotein substituted with digalactosyl 2,4-diacetamido-2,4,6-trideoxyhexose.

Authors:  E Stimson; M Virji; K Makepeace; A Dell; H R Morris; G Payne; J R Saunders; M P Jennings; S Barker; M Panico
Journal:  Mol Microbiol       Date:  1995-09       Impact factor: 3.501

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  175 in total

1.  Characterization of the human submandibular/sublingual saliva glycoproteome using lectin affinity chromatography coupled to multidimensional protein identification technology.

Authors:  Mireya Gonzalez-Begne; Bingwen Lu; Lujian Liao; Tao Xu; Gurrinder Bedi; James E Melvin; John R Yates
Journal:  J Proteome Res       Date:  2011-10-13       Impact factor: 4.466

2.  Mass spectrometric characterization of human N-acylethanolamine-hydrolyzing acid amidase.

Authors:  Jay M West; Nikolai Zvonok; Kyle M Whitten; Jodianne T Wood; Alexandros Makriyannis
Journal:  J Proteome Res       Date:  2012-01-03       Impact factor: 4.466

Review 3.  Glycan microarrays of fluorescently-tagged natural glycans.

Authors:  Xuezheng Song; Jamie Heimburg-Molinaro; David F Smith; Richard D Cummings
Journal:  Glycoconj J       Date:  2015-04-16       Impact factor: 2.916

4.  High-throughput N-glycan screening method for therapeutic antibodies using a microchip-based DNA analyzer: a promising methodology for monitoring monoclonal antibody N-glycosylation.

Authors:  Mitsuhiro Kinoshita; Kazuki Nakajima; Sachio Yamamoto; Shigeo Suzuki
Journal:  Anal Bioanal Chem       Date:  2021-06-02       Impact factor: 4.142

5.  Energy-resolved ion mobility-mass spectrometry--a concept to improve the separation of isomeric carbohydrates.

Authors:  Waldemar Hoffmann; Johanna Hofmann; Kevin Pagel
Journal:  J Am Soc Mass Spectrom       Date:  2014-01-03       Impact factor: 3.109

6.  A general strategy for the chemoenzymatic synthesis of asymmetrically branched N-glycans.

Authors:  Zhen Wang; Zoeisha S Chinoy; Shailesh G Ambre; Wenjie Peng; Ryan McBride; Robert P de Vries; John Glushka; James C Paulson; Geert-Jan Boons
Journal:  Science       Date:  2013-07-26       Impact factor: 47.728

Review 7.  Recent advances in ion mobility-mass spectrometry for improved structural characterization of glycans and glycoconjugates.

Authors:  Zhengwei Chen; Matthew S Glover; Lingjun Li
Journal:  Curr Opin Chem Biol       Date:  2017-11-05       Impact factor: 8.822

8.  Novel protein glycan side-chain biomarker and risk of incident type 2 diabetes mellitus.

Authors:  Akintunde O Akinkuolie; Aruna D Pradhan; Julie E Buring; Paul M Ridker; Samia Mora
Journal:  Arterioscler Thromb Vasc Biol       Date:  2015-04-23       Impact factor: 8.311

9.  Simultaneous quantification of N- and O-glycans using a solid-phase method.

Authors:  Shuang Yang; Yingwei Hu; Lori Sokoll; Hui Zhang
Journal:  Nat Protoc       Date:  2017-05-18       Impact factor: 13.491

10.  Cryogenic IR spectroscopy combined with ion mobility spectrometry for the analysis of human milk oligosaccharides.

Authors:  Neelam Khanal; Chiara Masellis; Michael Z Kamrath; David E Clemmer; Thomas R Rizzo
Journal:  Analyst       Date:  2018-04-16       Impact factor: 4.616

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