Literature DB >> 20851986

Development of a real-time qPCR method for detection and enumeration of Mycobacterium spp. in surface water.

Nicolas Radomski1, Françoise S Lucas, Régis Moilleron, Emmanuelle Cambau, Sophie Haenn, Laurent Moulin.   

Abstract

A real-time quantitative PCR method was developed for the detection and enumeration of Mycobacterium spp. from environmental samples and was compared to two other methods already described. The results showed that our method, targeting 16S rRNA, was more specific than the two previously published real-time quantitative PCR methods targeting another 16S rRNA locus and the hsp65 gene (100% versus 44% and 91%, respectively).

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Year:  2010        PMID： 20851986      PMCID： PMC2976254          DOI： 10.1128/AEM.00942-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  32 in total

1.  Identification of mycobacterial species by PCR sequencing of quinolone resistance-determining regions of DNA gyrase genes.

Authors:  Jean-Noël Dauendorffer; Isabelle Guillemin; Alexandra Aubry; Chantal Truffot-Pernot; Wladimir Sougakoff; Vincent Jarlier; Emmanuelle Cambau
Journal:  J Clin Microbiol       Date:  2003-03       Impact factor: 5.948

2.  Development of a nested qualitative real-time PCR assay to detect Aspergillus species DNA in clinical specimens.

Authors:  Catriona Halliday; Qi Xuan Wu; Gregory James; Tania Sorrell
Journal:  J Clin Microbiol       Date:  2005-10       Impact factor: 5.948

3.  Differentiation of Mycobacterium species by analysis of the heat-shock protein 65 gene (hsp65).

Authors:  Hong Kim; Sun-Hyun Kim; Tae-Sun Shim; Mi-Na Kim; Gill-Han Bai; Young-Gil Park; Sueng-Hyun Lee; Gue-Tae Chae; Chang-Yong Cha; Yoon-Hoh Kook; Bum-Joon Kim
Journal:  Int J Syst Evol Microbiol       Date:  2005-07       Impact factor: 2.747

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis.

Authors:  A Telenti; F Marchesi; M Balz; F Bally; E C Böttger; T Bodmer
Journal:  J Clin Microbiol       Date:  1993-02       Impact factor: 5.948

6.  Evaluation of recA sequences for identification of Mycobacterium species.

Authors:  K S Blackwood; C He; J Gunton; C Y Turenne; J Wolfe; A M Kabani
Journal:  J Clin Microbiol       Date:  2000-08       Impact factor: 5.948

7.  Simultaneous identification of Mycobacterium genus and Mycobacterium tuberculosis complex in clinical samples by 5'-exonuclease fluorogenic PCR.

Authors:  Albert García-Quintanilla; Julián González-Martín; Griselda Tudó; Mateu Espasa; María T Jiménez de Anta
Journal:  J Clin Microbiol       Date:  2002-12       Impact factor: 5.948

8.  Routine use of PCR-reverse cross-blot hybridization assay for rapid identification of Mycobacterium species growing in liquid media.

Authors:  M Sanguinetti; B Posteraro; F Ardito; S Zanetti; A Cingolani; L Sechi; A De Luca; L Ortona; G Fadda
Journal:  J Clin Microbiol       Date:  1998-06       Impact factor: 5.948

9.  The superoxide dismutase gene, a target for detection and identification of mycobacteria by PCR.

Authors:  J W Zolg; S Philippi-Schulz
Journal:  J Clin Microbiol       Date:  1994-11       Impact factor: 5.948

10.  Determination of genotypic diversity of Mycobacterium avium subspecies from human and animal origins by mycobacterial interspersed repetitive-unit-variable-number tandem-repeat and IS1311 restriction fragment length polymorphism typing methods.

Authors:  Nicolas Radomski; Virginie C Thibault; Claudine Karoui; Krystel de Cruz; Thierry Cochard; Cristina Gutiérrez; Philip Supply; Frank Biet; María Laura Boschiroli
Journal:  J Clin Microbiol       Date:  2010-01-27       Impact factor: 5.948
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  7 in total

1.  Culture-Independent Detection of Nontuberculous Mycobacteria in Clinical Respiratory Samples.

Authors:  Gianny P Scoleri; Jocelyn M Choo; Lex E X Leong; Thomas R Goddard; Lisa Shephard; Lucy D Burr; Ivan Bastian; Rachel M Thomson; Geraint B Rogers
Journal:  J Clin Microbiol       Date:  2016-07-13       Impact factor: 5.948

2.  Importance of Local and Regional Scales in Shaping Mycobacterial Abundance in Freshwater Lakes.

Authors:  Adélaïde Roguet; Claire Therial; Arnaud Catherine; Adèle Bressy; Gilles Varrault; Lila Bouhdamane; Viet Tran; Bruno J Lemaire; Brigitte Vincon-Leite; Mohamed Saad; Laurent Moulin; Françoise S Lucas
Journal:  Microb Ecol       Date:  2017-10-23       Impact factor: 4.552

3.  Molecular survey of the occurrence of Legionella spp., Mycobacterium spp., Pseudomonas aeruginosa, and amoeba hosts in two chloraminated drinking water distribution systems.

Authors:  Hong Wang; Marc Edwards; Joseph O Falkinham; Amy Pruden
Journal:  Appl Environ Microbiol       Date:  2012-06-29       Impact factor: 4.792

Review 4.  Methodological approaches for monitoring opportunistic pathogens in premise plumbing: A review.

Authors:  Hong Wang; Emilie Bédard; Michèle Prévost; Anne K Camper; Vincent R Hill; Amy Pruden
Journal:  Water Res       Date:  2017-03-25       Impact factor: 11.236

5.  Distribution and respiratory activity of mycobacteria in household water system of healthy volunteers in Japan.

Authors:  Tomoaki Ichijo; Yoko Izumi; Sayuri Nakamoto; Nobuyasu Yamaguchi; Masao Nasu
Journal:  PLoS One       Date:  2014-10-28       Impact factor: 3.240

6.  Microbial Communities Shaped by Treatment Processes in a Drinking Water Treatment Plant and Their Contribution and Threat to Drinking Water Safety.

Authors:  Qi Li; Shuili Yu; Lei Li; Guicai Liu; Zhengyang Gu; Minmin Liu; Zhiyuan Liu; Yubing Ye; Qing Xia; Liumo Ren
Journal:  Front Microbiol       Date:  2017-12-12       Impact factor: 5.640

7.  atpE gene as a new useful specific molecular target to quantify Mycobacterium in environmental samples.

Authors:  Nicolas Radomski; Adélaïde Roguet; Françoise S Lucas; Frédéric J Veyrier; Emmanuelle Cambau; Héberte Accrombessi; Régis Moilleron; Marcel A Behr; Laurent Moulin
Journal:  BMC Microbiol       Date:  2013-12-03       Impact factor: 3.605
  7 in total

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