Literature DB >> 208510

Estimation of rate and dissociation constants involving ternary complexes in reactions catalysed by yeast alcohol dehydrogenase.

F M Dickinson, C J Dickenson.   

Abstract

Stopped-flow studies of oxidation of butan-1-ol and propan-2-ol by NAD(+) in the presence of Phenol Red and large concentrations of yeast alcohol dehydrogenase give no evidence for the participation of a group of pK(a) approx. 7.6 in alcohol binding. Such a group has been implicated in ethanol binding to horse liver alcohol dehydrogenase [Shore, Gutfreund, Brooks, Santiago & Santiago (1974) Biochemistry13, 4185-4190]. The present result supports previous findings based on steady-state kinetic studies with the yeast enzyme. Stopped-flow studies of the yeast alcohol dehydrogenase-catalysed reduction of acetaldehyde by NADH in the presence of ethanol as product inhibitor indicate that the rate-limiting step is NAD(+) release from the enzyme-NAD(+)-ethanol product complex. This finding permits calculation of K(3), the dissociation constant for ethanol from the enzyme-NAD(+)-ethanol complex, by using the product-inhibition data of Dickenson & Dickinson (1978) (Biochem. J.171, 613-627). The calculations show that K(3) varies very little with pH in the range 5.95-8.9, and this agrees with the findings of the stopped-flow experiments described above. Absorption and fluorescence measurements on mixtures of substrates and coenzymes in the presence of high concentrations of alcohol dehydrogenase have been used to estimate values for the ratio [enzyme-NADH-acetaldehyde]/ [enzyme-NAD(+)-ethanol] at equilibrium. The values obtained were in the range 0.11+/-0.04, and this value together with estimates of K(3) was used to provide estimates of values for rate constants and dissociation constants for steps within the catalytic mechanism.

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Year:  1978        PMID: 208510      PMCID: PMC1184007          DOI: 10.1042/bj1710629

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  19 in total

1.  EQUILIBRIUM REACTION RATES AND THE MECHANISMS OF LIVER AND YEAST ALCOHOL DEHYDROGENASE.

Authors:  E SILVERSTEIN; P D BOYER
Journal:  J Biol Chem       Date:  1964-11       Impact factor: 5.157

2.  Kinetic studies of liver alcohol dehydrogenase.

Authors:  K DALZIEL
Journal:  Biochem J       Date:  1962-08       Impact factor: 3.857

3.  Yeasl alcohol dehydrogenase. I. The effect of pyridine derivatives on the reaction.

Authors:  J VAN EYS; N O KAPLAN
Journal:  Biochim Biophys Acta       Date:  1957-03

4.  The fluorescence spectrum of the complex of reduced phosphopyridine nucleotide and alcohol dehydrogenase from yeast.

Authors:  L N DUYSENS; G H KRONEBERG
Journal:  Biochim Biophys Acta       Date:  1957-11

5.  Inhibition by ethanol, acetaldehyde and trifluoroethanol of reactions catalysed by yeast and horse liver alcohol dehydrogenases.

Authors:  C J Dickenson; F M Dickinson
Journal:  Biochem J       Date:  1978-06-01       Impact factor: 3.857

6.  Proton equilibria and kinetics in the liver alcohol dehydrogenase reaction mechanism.

Authors:  J D Shore; H Gutfreund; R L Brooks; D Santiago; P Santiago
Journal:  Biochemistry       Date:  1974-09-24       Impact factor: 3.162

7.  Apparatus for rapid and sensitive spectrophotometry.

Authors:  Q H Gibson; L Milnes
Journal:  Biochem J       Date:  1964-04       Impact factor: 3.857

8.  A study of the ionic properties of the essential histidine residue of yeast alcohol dehydrogenase in complexes of the enzyme with its coenzymes and substrates.

Authors:  C J Dickenson; F M Dickinson
Journal:  Biochem J       Date:  1977-01-01       Impact factor: 3.857

9.  The role of an essential histidine residue of yeast alcohol dehydrogenase.

Authors:  C J Dickenson; F M Dickinson
Journal:  Eur J Biochem       Date:  1975-04-01

10.  A study of the kinetics and mechanism of yeast alcohol dehydrogenase with a variety of substrates.

Authors:  F M Dickinson; G P Monger
Journal:  Biochem J       Date:  1973-02       Impact factor: 3.857

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  9 in total

1.  Elusive transition state of alcohol dehydrogenase unveiled.

Authors:  Daniel Roston; Amnon Kohen
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-10       Impact factor: 11.205

2.  Kinetic barriers under steady-state conditions.

Authors:  J Südi
Journal:  Biochem J       Date:  1992-05-15       Impact factor: 3.857

3.  Inhibition by ethanol, acetaldehyde and trifluoroethanol of reactions catalysed by yeast and horse liver alcohol dehydrogenases.

Authors:  C J Dickenson; F M Dickinson
Journal:  Biochem J       Date:  1978-06-01       Impact factor: 3.857

4.  The kinetics of ox kidney biliverdin reductase in the pre-steady state. Evidence that the dissociation of bilirubin is the rate-determining step.

Authors:  E Rigney; T J Mantle; F M Dickinson
Journal:  Biochem J       Date:  1989-05-01       Impact factor: 3.857

5.  The role of the metal ion in the mechanism of the K+-activated aldehyde dehydrogenase of Saccharomyces cerevisiae.

Authors:  F M Dickinson; G W Haywood
Journal:  Biochem J       Date:  1987-10-15       Impact factor: 3.857

6.  Kinetic properties of highly purified preparations of sheep liver cytoplasmic aldehyde dehydrogenase.

Authors:  G J Hart; F M Dickinson
Journal:  Biochem J       Date:  1982-06-01       Impact factor: 3.857

7.  Yeast alcohol dehydrogenase structure and catalysis.

Authors:  Savarimuthu Baskar Raj; S Ramaswamy; Bryce V Plapp
Journal:  Biochemistry       Date:  2014-09-03       Impact factor: 3.162

8.  Macromolecular crowding effects on the kinetics of opposing reactions catalyzed by alcohol dehydrogenase.

Authors:  Xander E Wilcox; Charmaine B Chung; Kristin M Slade
Journal:  Biochem Biophys Rep       Date:  2021-02-20

9.  Rapid modeling of experimental molecular kinetics with simple electronic circuits instead of with complex differential equations.

Authors:  Yijie Deng; Douglas Raymond Beahm; Xinping Ran; Tanner G Riley; Rahul Sarpeshkar
Journal:  Front Bioeng Biotechnol       Date:  2022-09-28
  9 in total

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