Literature DB >> 20837665

Integrated microfluidic and imaging platform for a kinase activity radioassay to analyze minute patient cancer samples.

Cong Fang1, Yanju Wang, Nam T Vu, Wei-Yu Lin, Yao-Te Hsieh, Liudmilla Rubbi, Michael E Phelps, Markus Müschen, Yong-Mi Kim, Arion F Chatziioannou, Hsian-Rong Tseng, Thomas G Graeber.   

Abstract

Oncogenic kinase activity and the resulting aberrant growth and survival signaling are a common driving force of cancer. Accordingly, many successful molecularly targeted anticancer therapeutics are directed at inhibiting kinase activity. To assess kinase activity in minute patient samples, we have developed an immunocapture-based in vitro kinase assay on an integrated polydimethylsiloxane microfluidics platform that can reproducibly measure kinase activity from as few as 3,000 cells. For this platform, we adopted the standard radiometric (32)P-ATP-labeled phosphate transfer assay. Implementation on a microfluidic device required us to develop methods for repeated trapping and mixing of solid-phase affinity microbeads. We also developed a solid-state beta-particle camera imbedded directly below the microfluidic device for real-time quantitative detection of the signal from this and other microfluidic radiobioassays. We show that the resulting integrated device can measure ABL kinase activity from BCR-ABL-positive leukemia patient samples. The low sample input requirement of the device creates new potential for direct kinase activity experimentation and diagnostics on patient blood, bone marrow, and needle biopsy samples. ©2010 AACR.

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Year:  2010        PMID: 20837665      PMCID: PMC3989903          DOI: 10.1158/0008-5472.CAN-10-0851

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  44 in total

Review 1.  The protein kinase complement of the human genome.

Authors:  G Manning; D B Whyte; R Martinez; T Hunter; S Sudarsanam
Journal:  Science       Date:  2002-12-06       Impact factor: 47.728

Review 2.  Control and detection of chemical reactions in microfluidic systems.

Authors:  Andrew J DeMello
Journal:  Nature       Date:  2006-07-27       Impact factor: 49.962

3.  Rapid Prototyping of Microfluidic Systems in Poly(dimethylsiloxane).

Authors:  D C Duffy; J C McDonald; O J Schueller; G M Whitesides
Journal:  Anal Chem       Date:  1998-12-01       Impact factor: 6.986

4.  Phosphorylation of the ATP-binding loop directs oncogenicity of drug-resistant BCR-ABL mutants.

Authors:  Brian J Skaggs; Mercedes E Gorre; Ann Ryvkin; Michael R Burgess; Yongming Xie; Yun Han; Evangelia Komisopoulou; Lauren M Brown; Joseph A Loo; Elliot M Landaw; Charles L Sawyers; Thomas G Graeber
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-12       Impact factor: 11.205

5.  A microfluidic platform for systems pathology: multiparameter single-cell signaling measurements of clinical brain tumor specimens.

Authors:  Jing Sun; Michael D Masterman-Smith; Nicholas A Graham; Jing Jiao; Jack Mottahedeh; Dan R Laks; Minori Ohashi; Jason DeJesus; Ken-ichiro Kamei; Ki-Bum Lee; Hao Wang; Zeta T F Yu; Yi-Tsung Lu; Shuang Hou; Keyu Li; Max Liu; Nangang Zhang; Shutao Wang; Brigitte Angenieux; Eduard Panosyan; Eric R Samuels; Jun Park; Dirk Williams; Vera Konkankit; David Nathanson; R Michael van Dam; Michael E Phelps; Hong Wu; Linda M Liau; Paul S Mischel; Jorge A Lazareff; Harley I Kornblum; William H Yong; Thomas G Graeber; Hsian-Rong Tseng
Journal:  Cancer Res       Date:  2010-07-14       Impact factor: 12.701

6.  A high-throughput quantitative multiplex kinase assay for monitoring information flow in signaling networks: application to sepsis-apoptosis.

Authors:  Kevin A Janes; John G Albeck; Lili X Peng; Peter K Sorger; Douglas A Lauffenburger; Michael B Yaffe
Journal:  Mol Cell Proteomics       Date:  2003-06-26       Impact factor: 5.911

Review 7.  Mapping normal and cancer cell signalling networks: towards single-cell proteomics.

Authors:  Jonathan M Irish; Nikesh Kotecha; Garry P Nolan
Journal:  Nat Rev Cancer       Date:  2006-02       Impact factor: 60.716

8.  An integrated microfluidic device for large-scale in situ click chemistry screening.

Authors:  Yanju Wang; Wei-Yu Lin; Kan Liu; Rachel J Lin; Matthias Selke; Hartmuth C Kolb; Nangang Zhang; Xing-Zhong Zhao; Michael E Phelps; Clifton K F Shen; Kym F Faull; Hsian-Rong Tseng
Journal:  Lab Chip       Date:  2009-06-17       Impact factor: 6.799

9.  Nanofluidic proteomic assay for serial analysis of oncoprotein activation in clinical specimens.

Authors:  Alice C Fan; Debabrita Deb-Basu; Mathias W Orban; Jason R Gotlib; Yasodha Natkunam; Roger O'Neill; Rose-Ann Padua; Liwen Xu; Daryl Taketa; Amy E Shirer; Shelly Beer; Ada X Yee; David W Voehringer; Dean W Felsher
Journal:  Nat Med       Date:  2009-04-12       Impact factor: 53.440

10.  Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer.

Authors:  Klarisa Rikova; Ailan Guo; Qingfu Zeng; Anthony Possemato; Jian Yu; Herbert Haack; Julie Nardone; Kimberly Lee; Cynthia Reeves; Yu Li; Yerong Hu; Zhiping Tan; Matthew Stokes; Laura Sullivan; Jeffrey Mitchell; Randy Wetzel; Joan Macneill; Jian Min Ren; Jin Yuan; Corey E Bakalarski; Judit Villen; Jon M Kornhauser; Bradley Smith; Daiqiang Li; Xinmin Zhou; Steven P Gygi; Ting-Lei Gu; Roberto D Polakiewicz; John Rush; Michael J Comb
Journal:  Cell       Date:  2007-12-14       Impact factor: 41.582

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  16 in total

1.  Quantification of kinase activity in cell lysates via photopatterned macroporous poly(ethylene glycol) hydrogel arrays in microfluidic channels.

Authors:  Andrew G Lee; David J Beebe; Sean P Palecek
Journal:  Biomed Microdevices       Date:  2012-04       Impact factor: 2.838

2.  Betabox: a beta particle imaging system based on a position sensitive avalanche photodiode.

Authors:  A A Dooraghi; N T Vu; R W Silverman; R Farrell; K S Shah; J Wang; J R Heath; A F Chatziioannou
Journal:  Phys Med Biol       Date:  2013-05-08       Impact factor: 3.609

3.  Perspective: Flicking with flow: Can microfluidics revolutionize the cancer research?

Authors:  Tamal Das; Suman Chakraborty
Journal:  Biomicrofluidics       Date:  2013-01-31       Impact factor: 2.800

4.  Single-Cell Analysis of [18F]Fluorodeoxyglucose Uptake by Droplet Radiofluidics.

Authors:  Silvan Türkcan; Julia Nguyen; Marta Vilalta; Bin Shen; Frederick T Chin; Guillem Pratx; Paul Abbyad
Journal:  Anal Chem       Date:  2015-06-15       Impact factor: 6.986

5.  Macroporous hydrogel micropillars for quantifying Met kinase activity in cancer cell lysates.

Authors:  Alicia D Powers; Bi Liu; Andrew G Lee; Sean P Palecek
Journal:  Analyst       Date:  2012-07-20       Impact factor: 4.616

6.  Protein analytical assays for diagnosing, monitoring, and choosing treatment for cancer patients.

Authors:  Alicia D Powers; Sean P Palecek
Journal:  J Healthc Eng       Date:  2012-12       Impact factor: 2.682

Review 7.  Micro total analysis systems for cell biology and biochemical assays.

Authors:  Michelle L Kovarik; Philip C Gach; Douglas M Ornoff; Yuli Wang; Joseph Balowski; Lila Farrag; Nancy L Allbritton
Journal:  Anal Chem       Date:  2011-10-21       Impact factor: 6.986

8.  Multiplexed tyrosine kinase activity detection in cancer cells using a hydrogel immobilized substrate.

Authors:  Alicia D Powers; Wenquing Han; Bi Liu; Sean P Palecek
Journal:  Anal Bioanal Chem       Date:  2013-04-27       Impact factor: 4.142

9.  Mapping phospho-catalytic dependencies of therapy-resistant tumours reveals actionable vulnerabilities.

Authors:  Jean-Philippe Coppé; Miki Mori; Bo Pan; Christina Yau; Denise M Wolf; Ana Ruiz-Saenz; Diede Brunen; Anirudh Prahallad; Paulien Cornelissen-Steijger; Kristel Kemper; Christian Posch; Changjun Wang; Courtney A Dreyer; Oscar Krijgsman; Pei Rong Evelyn Lee; Zhongzhong Chen; Daniel S Peeper; Mark M Moasser; René Bernards; Laura J van 't Veer
Journal:  Nat Cell Biol       Date:  2019-06-03       Impact factor: 28.824

Review 10.  Miniaturized pre-clinical cancer models as research and diagnostic tools.

Authors:  Maria Håkanson; Edna Cukierman; Mirren Charnley
Journal:  Adv Drug Deliv Rev       Date:  2013-12-01       Impact factor: 15.470

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