Literature DB >> 20833786

Environmental factors shape sediment anammox bacterial communities in hypernutrified Jiaozhou Bay, China.

Hongyue Dang1, Ruipeng Chen, Lin Wang, Lizhong Guo, Pingping Chen, Zuwang Tang, Fang Tian, Shaozheng Li, Martin G Klotz.   

Abstract

Bacterial anaerobic ammonium oxidation (anammox) is an important process in the marine nitrogen cycle. Because ongoing eutrophication of coastal bays contributes significantly to the formation of low-oxygen zones, monitoring of the anammox bacterial community offers a unique opportunity for assessment of anthropogenic perturbations in these environments. The current study used targeting of 16S rRNA and hzo genes to characterize the composition and structure of the anammox bacterial community in the sediments of the eutrophic Jiaozhou Bay, thereby unraveling their diversity, abundance, and distribution. Abundance and distribution of hzo genes revealed a greater taxonomic diversity in Jiaozhou Bay, including several novel clades of anammox bacteria. In contrast, the targeting of 16S rRNA genes verified the presence of only "Candidatus Scalindua," albeit with a high microdiversity. The genus "Ca. Scalindua" comprised the apparent majority of active sediment anammox bacteria. Multivariate statistical analyses indicated a heterogeneous distribution of the anammox bacterial assemblages in Jiaozhou Bay. Of all environmental parameters investigated, sediment organic C/organic N (OrgC/OrgN), nitrite concentration, and sediment median grain size were found to impact the composition, structure, and distribution of the sediment anammox bacterial community. Analysis of Pearson correlations between environmental factors and abundance of 16S rRNA and hzo genes as determined by fluorescent real-time PCR suggests that the local nitrite concentration is the key regulator of the abundance of anammox bacteria in Jiaozhou Bay sediments.

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Year:  2010        PMID: 20833786      PMCID: PMC2976235          DOI: 10.1128/AEM.01264-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  64 in total

1.  Diverse tetracycline resistant bacteria and resistance genes from coastal waters of Jiaozhou Bay.

Authors:  Hongyue Dang; Jing Ren; Linsheng Song; Song Sun; Liguo An
Journal:  Microb Ecol       Date:  2007-08-01       Impact factor: 4.552

Review 2.  Anammox bacteria: from discovery to application.

Authors:  J Gijs Kuenen
Journal:  Nat Rev Microbiol       Date:  2008-04       Impact factor: 60.633

3.  16S rRNA gene and lipid biomarker evidence for anaerobic ammonium-oxidizing bacteria (anammox) in California and Nevada hot springs.

Authors:  Andrea Jaeschke; Huub J M Op den Camp; Harry Harhangi; Adam Klimiuk; Ellen C Hopmans; Mike S M Jetten; Stefan Schouten; Jaap S Sinninghe Damsté
Journal:  FEMS Microbiol Ecol       Date:  2009-03       Impact factor: 4.194

4.  Detection of anaerobic ammonium-oxidizing bacteria in Ago Bay sediments.

Authors:  Jun Nakajima; Makiko Sakka; Tetsuya Kimura; Kazuo Sakka
Journal:  Biosci Biotechnol Biochem       Date:  2008-08-07       Impact factor: 2.043

5.  Evolution of an octahaem cytochrome c protein family that is key to aerobic and anaerobic ammonia oxidation by bacteria.

Authors:  Martin G Klotz; Markus C Schmid; Marc Strous; Huub J M op den Camp; Mike S M Jetten; Alan B Hooper
Journal:  Environ Microbiol       Date:  2008-08-28       Impact factor: 5.491

6.  Diversity of ammonium-oxidizing bacteria in a granular sludge anaerobic ammonium-oxidizing (anammox) reactor.

Authors:  Zhe-Xue Quan; Sung-Keun Rhee; Jian-E Zuo; Yang Yang; Jin-Woo Bae; Ja Ryeong Park; Sung-Taik Lee; Yong-Ha Park
Journal:  Environ Microbiol       Date:  2008-05-09       Impact factor: 5.491

7.  Diversity and spatial distribution of sediment ammonia-oxidizing crenarchaeota in response to estuarine and environmental gradients in the Changjiang Estuary and East China Sea.

Authors:  Hongyue Dang; Xiaoxia Zhang; Jin Sun; Tiegang Li; Zhinan Zhang; Guanpin Yang
Journal:  Microbiology       Date:  2008-07       Impact factor: 2.777

8.  A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones.

Authors:  Dagmar Woebken; Phyllis Lam; Marcel M M Kuypers; S Wajih A Naqvi; Boran Kartal; Marc Strous; Mike S M Jetten; Bernhard M Fuchs; Rudolf Amann
Journal:  Environ Microbiol       Date:  2008-05-27       Impact factor: 5.491

9.  Environmental detection of octahaem cytochrome c hydroxylamine/hydrazine oxidoreductase genes of aerobic and anaerobic ammonium-oxidizing bacteria.

Authors:  Markus C Schmid; Alan B Hooper; Martin G Klotz; Dagmar Woebken; Phyllis Lam; Marcel M M Kuypers; Andreas Pommerening-Roeser; Huub J M Op den Camp; Mike S M Jetten
Journal:  Environ Microbiol       Date:  2008-11       Impact factor: 5.491

10.  Transcription of nitrification genes by the methane-oxidizing bacterium, Methylococcus capsulatus strain Bath.

Authors:  Amisha T Poret-Peterson; James E Graham; Jay Gulledge; Martin G Klotz
Journal:  ISME J       Date:  2008-07-24       Impact factor: 10.302

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  38 in total

1.  Composition and variation of sediment bacterial and nirS-harboring bacterial communities at representative sites of the Bohai Gulf coastal zone, China.

Authors:  Xiangyu Guan; Lingling Zhu; Youxun Li; Yuxuan Xie; Mingzhang Zhao; Ximing Luo
Journal:  World J Microbiol Biotechnol       Date:  2013-11-09       Impact factor: 3.312

2.  Residence of habitat-specific anammox bacteria in the deep-sea subsurface sediments of the South China Sea: analyses of marker gene abundance with physical chemical parameters.

Authors:  Yi-Guo Hong; Meng Li; Huiluo Cao; Ji-Dong Gu
Journal:  Microb Ecol       Date:  2011-04-14       Impact factor: 4.552

3.  Diversity and Abundance of the Denitrifying Microbiota in the Sediment of Eastern China Marginal Seas and the Impact of Environmental Factors.

Authors:  Minghong Gao; Jiwen Liu; Yanlu Qiao; Meixun Zhao; Xiao-Hua Zhang
Journal:  Microb Ecol       Date:  2016-12-06       Impact factor: 4.552

4.  Temporal and Spatial Dynamics of Sediment Anaerobic Ammonium Oxidation (Anammox) Bacteria in Freshwater Lakes.

Authors:  Yuyin Yang; Yu Dai; Ningning Li; Bingxin Li; Shuguang Xie; Yong Liu
Journal:  Microb Ecol       Date:  2016-10-10       Impact factor: 4.552

5.  Environment-dependent distribution of the sediment nifH-harboring microbiota in the Northern South China Sea.

Authors:  Hongyue Dang; Jinying Yang; Jing Li; Xiwu Luan; Yunbo Zhang; Guizhou Gu; Rongrong Xue; Mingyue Zong; Martin G Klotz
Journal:  Appl Environ Microbiol       Date:  2012-10-12       Impact factor: 4.792

6.  Community structures and distribution of anaerobic ammonium oxidizing and nirS-encoding nitrite-reducing bacteria in surface sediments of the South China Sea.

Authors:  Meng Li; Yiguo Hong; Huiluo Cao; Ji-Dong Gu
Journal:  Microb Ecol       Date:  2013-01-29       Impact factor: 4.552

7.  Anammox bacterial populations in deep marine hypersaline gradient systems.

Authors:  Sara Borin; Francesca Mapelli; Eleonora Rolli; Bongkeun Song; Craig Tobias; Markus C Schmid; Gert J De Lange; Gert J Reichart; Stefan Schouten; Mike Jetten; Daniele Daffonchio
Journal:  Extremophiles       Date:  2013-01-23       Impact factor: 2.395

8.  Evidence for anaerobic ammonium oxidation process in freshwater sediments of aquaculture ponds.

Authors:  Li-dong Shen; Hong-sheng Wu; Zhi-qiu Gao; Yun-jie Ruan; Xiang-hua Xu; Ji Li; Shi-jie Ma; Pei-hui Zheng
Journal:  Environ Sci Pollut Res Int       Date:  2015-09-12       Impact factor: 4.223

9.  Co-occurring anammox, denitrification, and codenitrification in agricultural soils.

Authors:  Andrew Long; Joshua Heitman; Craig Tobias; Rebecca Philips; Bongkeun Song
Journal:  Appl Environ Microbiol       Date:  2012-10-19       Impact factor: 4.792

10.  Anaerobic ammonia-oxidizing bacteria in tropical bioaugmented zero water exchange aquaculture ponds.

Authors:  Ramya Ramankutty Nair; Boobal Rangaswamy; Bright Singh Isaac Sarojini; Valsamma Joseph
Journal:  Environ Sci Pollut Res Int       Date:  2020-01-15       Impact factor: 4.223

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