Literature DB >> 20816740

Reference gene selection for quantitative real-time polymerase chain reaction in Populus.

Meng Xu1, Bo Zhang, Xiaohua Su, Shougong Zhang, Minren Huang.   

Abstract

Accurate quantification of gene expression with quantitative real-time polymerase chain reaction (qRT-PCR) relies on the choice of an appropriate reference gene. In this study, nine candidate reference genes were selected to study the expression stability for qRT-PCR normalization in adventitious rooting of Populus hardwood cuttings. geNorm, NormFinder, and BestKeeper analysis revealed that actin isoform B (ACT) was the most unstable gene across developmental stages, whereas elongation factor 1 alpha (EF1a) and 18S recombinant RNA (18S) emerged as the most appropriate reference genes for qRT-PCR analysis in this complex developmental process. Crown
Copyright © 2010. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20816740     DOI: 10.1016/j.ab.2010.08.044

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  46 in total

1.  Reference gene selection for qRT-PCR in Caragana korshinskii Kom. under different stress conditions.

Authors:  Qi Yang; Jiajia Yin; Gao Li; Liwang Qi; Feiyun Yang; Ruigang Wang; Guojing Li
Journal:  Mol Biol Rep       Date:  2014-01-23       Impact factor: 2.316

2.  Dynamic changes in ABA content in water-stressed Populus nigra: effects on carbon fixation and soluble carbohydrates.

Authors:  Cecilia Brunetti; Antonella Gori; Giovanni Marino; Paolo Latini; Anatoly P Sobolev; Andrea Nardini; Matthew Haworth; Alessio Giovannelli; Donatella Capitani; Francesco Loreto; Gail Taylor; Giuseppe Scarascia Mugnozza; Antoine Harfouche; Mauro Centritto
Journal:  Ann Bot       Date:  2019-10-29       Impact factor: 4.357

3.  Reference gene selection for quantitative real-time PCR in Chrysanthemum subjected to biotic and abiotic stress.

Authors:  Chunsun Gu; Sumei Chen; Zhaolei Liu; Hong Shan; Huolin Luo; Zhiyong Guan; Fadi Chen
Journal:  Mol Biotechnol       Date:  2011-10       Impact factor: 2.695

4.  Selection of reference genes for normalization of qRT-PCR analysis of differentially expressed genes in soybean exposed to cadmium.

Authors:  Yi Wang; Kangfu Yu; Vaino Poysa; Chun Shi; Yonghong Zhou
Journal:  Mol Biol Rep       Date:  2011-05-28       Impact factor: 2.316

5.  Influence of over-expression of the Flowering Promoting Factor 1 gene (FPF1) from Arabidopsis on wood formation in hybrid poplar (Populus tremula L. × P. tremuloides Michx.).

Authors:  Hans Hoenicka; Silke Lautner; Andreas Klingberg; Gerald Koch; Fadia El-Sherif; Denise Lehnhardt; Bo Zhang; Ingo Burgert; Jürgen Odermatt; Siegbert Melzer; Jörg Fromm; Matthias Fladung
Journal:  Planta       Date:  2011-09-10       Impact factor: 4.116

6.  Identification of suitable reference genes in mangrove Aegiceras corniculatum under abiotic stresses.

Authors:  Ya-Lan Peng; You-Shao Wang; Ji-Dong Gu
Journal:  Ecotoxicology       Date:  2015-05-17       Impact factor: 2.823

7.  The Occurrence of Sulfated Salicinoids in Poplar and Their Formation by Sulfotransferase1.

Authors:  Nathalie D Lackus; Andrea Müller; Tabea D U Kröber; Michael Reichelt; Axel Schmidt; Yoko Nakamura; Christian Paetz; Katrin Luck; Richard L Lindroth; C Peter Constabel; Sybille B Unsicker; Jonathan Gershenzon; Tobias G Köllner
Journal:  Plant Physiol       Date:  2020-02-25       Impact factor: 8.340

8.  Normalizing gene expression by quantitative PCR during somatic embryogenesis in two representative conifer species: Pinus pinaster and Picea abies.

Authors:  José J de Vega-Bartol; Raquen Raissa Santos; Marta Simões; Célia M Miguel
Journal:  Plant Cell Rep       Date:  2013-03-26       Impact factor: 4.570

9.  Defining reference genes for qPCR normalization to study biotic and abiotic stress responses in Vigna mungo.

Authors:  Anirban Kundu; Anju Patel; Amita Pal
Journal:  Plant Cell Rep       Date:  2013-07-19       Impact factor: 4.570

10.  A peroxisomal β-oxidative pathway contributes to the formation of C6-C1 aromatic volatiles in poplar.

Authors:  Nathalie D Lackus; Axel Schmidt; Jonathan Gershenzon; Tobias G Köllner
Journal:  Plant Physiol       Date:  2021-06-11       Impact factor: 8.340

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.