Literature DB >> 20799098

Pedobacter yonginense sp. nov., isolated from a mesotrophic artificial Lake in Korea.

Yochan Joung1, Hanuel Kim, Kiseong Joh.   

Abstract

A non-motile red-pigmented bacterium, designated strain HMD1002(T), was isolated from an artificial lake located on the campus of Hankuk University of Foreign Studies, South Korea. The major fatty acids were iso-C(15:0) (29.6%), Summed Feature 3 (comprising C(16:1) omega7c and/or iso-C(15:0) 2-OH; 17.5%) and iso-C(17:0) 3-OH (12.5%). The major isoprenoid quinone was menaquinone-7 (MK-7). The DNA G+C content was 41.0 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that strain HMD1002(T) formed a lineage in the genus Pedobacer and was closely related to Pedobacer terrae (96.3%) and Pedobacer suwonensis (95.8%) in sequence similarity. On the basis of the evidence presented in this study, strain HMD1002(T) represents a novel species of the genus Pedobacter, for which the name Pedobacter yonginense sp.nov. is proposed. The type strain is HMD1002(T) (=KCTC 22721(T) = CEC(T) 7544(T)).

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20799098     DOI: 10.1007/s12275-010-0010-4

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  21 in total

1.  Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family.

Authors:  Jean-Francois Bernardet; Yasuyoshi Nakagawa; Barry Holmes
Journal:  Int J Syst Evol Microbiol       Date:  2002-05       Impact factor: 2.747

2.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

Review 3.  Myeloma with involvement of the serous cavities. Cytologic and immunochemical diagnosis and literature review.

Authors:  R L Sasser; L T Yam; C Y Li
Journal:  Acta Cytol       Date:  1990 Jul-Aug       Impact factor: 2.319

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov.

Authors:  P L Steyn; P Segers; M Vancanneyt; P Sandra; K Kersters; J J Joubert
Journal:  Int J Syst Bacteriol       Date:  1998-01

6.  Pedobacter roseus sp. nov., isolated from a hypertrophic pond, and emended description of the genus Pedobacter.

Authors:  Chung Yeon Hwang; Dong Han Choi; Byung Cheol Cho
Journal:  Int J Syst Evol Microbiol       Date:  2006-08       Impact factor: 2.747

7.  Pedobacter ginsengisoli sp. nov., a DNase-producing bacterium isolated from soil of a ginseng field in South Korea.

Authors:  Leonid N Ten; Qing-Mei Liu; Wan-Taek Im; Myungjin Lee; Deok-Chun Yang; Sung-Taik Lee
Journal:  Int J Syst Evol Microbiol       Date:  2006-11       Impact factor: 2.747

8.  Pedobacter lentus sp. nov. and Pedobacter terricola sp. nov., isolated from soil.

Authors:  Jung-Hoon Yoon; So-Jung Kang; Sooyeon Park; Tae-Kwang Oh
Journal:  Int J Syst Evol Microbiol       Date:  2007-09       Impact factor: 2.747

9.  Parvularcula bermudensis gen. nov., sp. nov., a marine bacterium that forms a deep branch in the alpha-Proteobacteria.

Authors:  Jang-Cheon Cho; Stephen J Giovannoni
Journal:  Int J Syst Evol Microbiol       Date:  2003-07       Impact factor: 2.747

10.  Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana flood-plain sediment and forest soil.

Authors:  Nathan S Gordon; Alejandra Valenzuela; Sandra M Adams; Philip W Ramsey; Jarrod L Pollock; William E Holben; James E Gannon
Journal:  Int J Syst Evol Microbiol       Date:  2009-06-19       Impact factor: 2.747

View more
  3 in total

1.  Pedobacter aquicola sp. nov., isolated from freshwater.

Authors:  Yochan Joung; Hye-Jin Jang; Miri Park; Jaeho Song; Jang-Cheon Cho
Journal:  J Microbiol       Date:  2018-06-14       Impact factor: 3.422

2.  Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113).

Authors:  Konstantinos Liolios; Johannes Sikorski; Meagan Lu; Matt Nolan; Alla Lapidus; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan-Fang Cheng; Roxanne Tapia; Cliff Han; Lynne Goodwin; Sam Pitluck; Marcel Huntemann; Natalia Ivanova; Ioanna Pagani; Konstantinos Mavromatis; Galina Ovchinikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Evelyne-Marie Brambilla; Oleg Kotsyurbenko; Manfred Rohde; Brian J Tindall; Birte Abt; Markus Göker; John C Detter; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Hans-Peter Klenk; Nikos C Kyrpides
Journal:  Stand Genomic Sci       Date:  2011-09-23

3.  Characterization of shed medicinal leech mucus reveals a diverse microbiota.

Authors:  Brittany M Ott; Allen Rickards; Lauren Gehrke; Rita V M Rio
Journal:  Front Microbiol       Date:  2015-01-09       Impact factor: 5.640

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.