Literature DB >> 19542109

Pedobacter nyackensis sp. nov., Pedobacter alluvionis sp. nov. and Pedobacter borealis sp. nov., isolated from Montana flood-plain sediment and forest soil.

Nathan S Gordon1, Alejandra Valenzuela, Sandra M Adams, Philip W Ramsey, Jarrod L Pollock, William E Holben, James E Gannon.   

Abstract

Three Gram-negative, rod-shaped, non-spore-forming eubacterial strains were isolated in western Montana, USA, and subjected to taxonomic studies. Strains NWG-II14(T) and NWER-II11(T) were isolated from hyporheic sediments of a large alluvial flood plain, whereas strain G-1(T) was isolated from a conifer forest soil. On the basis of 16S rRNA gene sequence similarity, strains NWG-II14(T), NWER-II11(T) and G-1(T) were shown to belong to the family Sphingobacteriaceae and are most closely related to various species of the genus Pedobacter. The results of molecular, physiological and biochemical tests allowed genotypic and phenotypic differentiation of these three strains from 23 Pedobacter species with validly published names. The three isolates therefore represent novel species, for which the names Pedobacter nyackensis sp. nov. (type strain NWG-II14(T) =DSM 19625(T) =LMG 24260(T)), Pedobacter alluvionis sp. nov. (type strain NWER-II11(T) =DSM 19624(T) =LMG 24258(T)) and Pedobacter borealis sp. nov. (type strain G-1(T) =DSM 19626(T) =LMG 24259(T)) are proposed.

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Year:  2009        PMID: 19542109     DOI: 10.1099/ijs.0.000158-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  13 in total

1.  Draft genome sequence of Pedobacter agri PB92T, which belongs to the family Sphingobacteriaceae.

Authors:  Myunglip Lee; Seong Woon Roh; Hae-Won Lee; Kyung June Yim; Kil-Nam Kim; Jin-Woo Bae; Kwang-Sik Choi; You-Jin Jeon; Won-Kyo Jung; Heewan Kang; Chang-Gu Hyun; Daekyung Kim
Journal:  J Bacteriol       Date:  2012-07       Impact factor: 3.490

2.  Pedobacter aquicola sp. nov., isolated from freshwater.

Authors:  Yochan Joung; Hye-Jin Jang; Miri Park; Jaeho Song; Jang-Cheon Cho
Journal:  J Microbiol       Date:  2018-06-14       Impact factor: 3.422

3.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

4.  Pedobacter soyangensis sp. nov., isolated from Lake Soyang in Korea.

Authors:  Yochan Joung; Heeyoung Kang; Haneul Kim; Beom-Il Lee; O-Seob Kwon; Kiseong Joh
Journal:  J Microbiol       Date:  2014-01-04       Impact factor: 3.422

5.  Pedobacter yonginense sp. nov., isolated from a mesotrophic artificial Lake in Korea.

Authors:  Yochan Joung; Hanuel Kim; Kiseong Joh
Journal:  J Microbiol       Date:  2010-08-20       Impact factor: 3.422

6.  Pedobacter namyangjuensis sp. nov. isolated from soil and reclassification of Nubsella zeaxanthinifaciens Asker et al. 2008 as Pedobacter zeaxanthinifaciens comb. nov.

Authors:  Dong-Uk Kim; Yoo-Jeong Kim; Dong-Hyeon Shin; Hang-Yeon Weon; Soon-Wo Kwon; Chi-Nam Seong; Jong-Ok Ka
Journal:  J Microbiol       Date:  2013-03-02       Impact factor: 3.422

7.  Pedobacter hainanensis sp. nov., isolated from seaside soil.

Authors:  Yan-yu Meng; Yun-bin Fu; Meng-yu Wang; Yong Zhao; Qi-shun Liu; Yu-guang Du
Journal:  Curr Microbiol       Date:  2013-01-13       Impact factor: 2.188

8.  Pedobacter jeongneungensis sp. nov., isolated from forest soil.

Authors:  Jaejoon Jung; Woojun Park
Journal:  J Microbiol       Date:  2012-07-21       Impact factor: 3.422

9.  Pedobacter pollutisoli sp. nov., Isolated from Tetrabromobisphenol A-Contaminated Soil.

Authors:  Yang Mu; Zhuang Ke; Chen-Xi Feng; Xiao-Wei Wang; Xiao-Wen Wang; Hong-Mei Wang; Qing Chen; Jian He
Journal:  Curr Microbiol       Date:  2019-02-13       Impact factor: 2.188

10.  Exploration of Social Spreading Reveals That This Behavior Is Prevalent among Pedobacter and Pseudomonas fluorescens Isolates and That There Are Variations in the Induction of the Phenotype.

Authors:  Lucy M McCully; Jasmine Graslie; Alana R McGraw; Adam S Bitzer; Auður M Sigurbjörnsdóttir; Oddur Vilhelmsson; Mark W Silby
Journal:  Appl Environ Microbiol       Date:  2021-07-21       Impact factor: 4.792

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