Literature DB >> 20730481

Characterizing the fine structure of a neural sensory code through information distortion.

Alexander G Dimitrov1, Graham I Cummins, Aditi Baker, Zane N Aldworth.   

Abstract

We present an application of the information distortion approach to neural coding. The approach allows the discovery of neural symbols and the corresponding stimulus space of a neuron or neural ensemble simultaneously and quantitatively, making few assumptions about the nature of either code or relevant features. The neural codebook is derived by quantitizing sensory stimuli and neural responses into small reproduction sets, and optimizing the quantization to minimize the information distortion function. The application of this approach to the analysis of coding in sensory interneurons involved a further restriction of the space of allowed quantitizers to a smaller family of parametric distributions. We show that, for some cells in this system, a significant amount of information is encoded in patterns of spikes that would not be discovered through analyses based on linear stimulus-response measures.

Mesh:

Year:  2010        PMID: 20730481     DOI: 10.1007/s10827-010-0261-4

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  20 in total

1.  Neural coding and decoding: communication channels and quantization.

Authors:  A G Dimitrov; J P Miller
Journal:  Network       Date:  2001-11       Impact factor: 1.273

2.  Information-theoretic analysis of neural coding.

Authors:  D H Johnson; C M Gruner; K Baggerly; C Seshagiri
Journal:  J Comput Neurosci       Date:  2001 Jan-Feb       Impact factor: 1.621

3.  Analysis of neural coding through quantization with an information-based distortion measure.

Authors:  Alexander G Dimitrov; John P Miller; Tomás Gedeon; Zane Aldworth; Albert E Parker
Journal:  Network       Date:  2003-02       Impact factor: 1.273

Review 4.  White-noise analysis in neurophysiology.

Authors:  H M Sakai
Journal:  Physiol Rev       Date:  1992-04       Impact factor: 37.312

5.  Asymptotic theory of information-theoretic experimental design.

Authors:  Liam Paninski
Journal:  Neural Comput       Date:  2005-07       Impact factor: 2.026

6.  Dimensionality reduction in neural models: an information-theoretic generalization of spike-triggered average and covariance analysis.

Authors:  Jonathan W Pillow; Eero P Simoncelli
Journal:  J Vis       Date:  2006-04-28       Impact factor: 2.240

7.  Representation of sensory information in the cricket cercal sensory system. I. Response properties of the primary interneurons.

Authors:  J P Miller; G A Jacobs; F E Theunissen
Journal:  J Neurophysiol       Date:  1991-11       Impact factor: 2.714

8.  Anatomy and physiology of identified wind-sensitive local interneurons in the cricket cercal sensory system.

Authors:  D A Bodnar; J P Miller; G A Jacobs
Journal:  J Comp Physiol A       Date:  1991-05       Impact factor: 1.836

9.  Effects of adaptation on neural coding by primary sensory interneurons in the cricket cercal system.

Authors:  H Clague; F Theunissen; J P Miller
Journal:  J Neurophysiol       Date:  1997-01       Impact factor: 2.714

10.  Spatio-temporal correlations and visual signalling in a complete neuronal population.

Authors:  Jonathan W Pillow; Jonathon Shlens; Liam Paninski; Alexander Sher; Alan M Litke; E J Chichilnisky; Eero P Simoncelli
Journal:  Nature       Date:  2008-07-23       Impact factor: 49.962

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  2 in total

1.  Information theory in neuroscience.

Authors:  Alexander G Dimitrov; Aurel A Lazar; Jonathan D Victor
Journal:  J Comput Neurosci       Date:  2011-02       Impact factor: 1.621

2.  Temporal encoding in a nervous system.

Authors:  Zane N Aldworth; Alexander G Dimitrov; Graham I Cummins; Tomáš Gedeon; John P Miller
Journal:  PLoS Comput Biol       Date:  2011-05-05       Impact factor: 4.475

  2 in total

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