Literature DB >> 20725661

Quantum chemical dissection of the classic terpinyl/pinyl/bornyl/camphyl cation conundrum-the role of pyrophosphate in manipulating pathways to monoterpenes.

Young J Hong1, Dean J Tantillo.   

Abstract

Based on quantum chemical studies, mechanisms to form bornyl diphosphate from geranyl diphosphate are suggested. While bornyl diphosphate is usually proposed to be generated via combination of the pyrophosphate group with a secondary bornyl cation, quantum chemical computations indicate that the bornyl cation is actually not a minimum. Instead, concerted attack of the pyrophosphate group coupled with an alkyl shift could yield bornyl diphosphate from either the pinyl cation or the camphyl cation. Hints of bifurcating pathways on the energy surfaces for such reactions were also uncovered. Of particular note is the development and validation of a large model of the pyrophosphate counterion treated entirely with quantum chemistry.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20725661     DOI: 10.1039/c0ob00167h

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  17 in total

1.  Quantum chemical study of the isomerization of 24-methylenecycloartanol, a potential marker of olive oil refining.

Authors:  Henry B Wedler; Ryan P Pemberton; Valère Lounnas; Gert Vriend; Dean J Tantillo; Selina C Wang
Journal:  J Mol Model       Date:  2015-04-10       Impact factor: 1.810

2.  Experiment and Simulation Reveal How Mutations in Functional Plasticity Regions Guide Plant Monoterpene Synthase Product Outcome.

Authors:  Nicole G H Leferink; Kara E Ranaghan; Vijaykumar Karuppiah; Andrew Currin; Marc W van der Kamp; Adrian J Mulholland; Nigel S Scrutton
Journal:  ACS Catal       Date:  2018-03-24       Impact factor: 13.084

3.  Effect of isotopically sensitive branching on product distribution for pentalenene synthase: support for a mechanism predicted by quantum chemistry.

Authors:  Liansuo Zu; Meimei Xu; Michael W Lodewyk; David E Cane; Reuben J Peters; Dean J Tantillo
Journal:  J Am Chem Soc       Date:  2012-07-09       Impact factor: 15.419

Review 4.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

Review 5.  The expanding world of biosynthetic pericyclases: cooperation of experiment and theory for discovery.

Authors:  Cooper S Jamieson; Masao Ohashi; Fang Liu; Yi Tang; K N Houk
Journal:  Nat Prod Rep       Date:  2019-05-22       Impact factor: 13.423

6.  Structure of 2-methylisoborneol synthase from Streptomyces coelicolor and implications for the cyclization of a noncanonical C-methylated monoterpenoid substrate.

Authors:  Mustafa Köksal; Wayne K W Chou; David E Cane; David W Christianson
Journal:  Biochemistry       Date:  2012-03-28       Impact factor: 3.162

7.  Functional analysis of (4S)-limonene synthase mutants reveals determinants of catalytic outcome in a model monoterpene synthase.

Authors:  Narayanan Srividya; Edward M Davis; Rodney B Croteau; B Markus Lange
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-02       Impact factor: 11.205

8.  Predicting Productive Binding Modes for Substrates and Carbocation Intermediates in Terpene Synthases-Bornyl Diphosphate Synthase as a Representative Case.

Authors:  Terrence E O'Brien; Steven J Bertolani; Yue Zhang; Justin B Siegel; Dean J Tantillo
Journal:  ACS Catal       Date:  2018-03-08       Impact factor: 13.084

9.  Chemical Control in the Battle against Fidelity in Promiscuous Natural Product Biosynthesis: The Case of Trichodiene Synthase.

Authors:  Mudit Dixit; Michal Weitman; Jiali Gao; Dan T Major
Journal:  ACS Catal       Date:  2016-12-02       Impact factor: 13.084

Review 10.  Terpenoid synthase structures: a so far incomplete view of complex catalysis.

Authors:  Yang Gao; Richard B Honzatko; Reuben J Peters
Journal:  Nat Prod Rep       Date:  2012-08-21       Impact factor: 13.423

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.