Literature DB >> 20705336

An alternative splicing network links cell-cycle control to apoptosis.

Michael J Moore1, Qingqing Wang, Caleb J Kennedy, Pamela A Silver.   

Abstract

Alternative splicing is a vast source of biological regulation and diversity that is misregulated in cancer and other diseases. To investigate global control of alternative splicing in human cells, we analyzed splicing of mRNAs encoding Bcl2 family apoptosis factors in a genome-wide siRNA screen. The screen identified many regulators of Bcl-x and Mcl1 splicing, notably an extensive network of cell-cycle factors linked to aurora kinase A. Drugs or siRNAs that induce mitotic arrest promote proapoptotic splicing of Bcl-x, Mcl1, and caspase-9 and alter splicing of other apoptotic transcripts. This response precedes mitotic arrest, indicating coordinated upregulation of prodeath splice variants that promotes apoptosis in arrested cells. These shifts correspond to posttranslational turnover of splicing regulator ASF/SF2, which directly binds and regulates these target mRNAs and globally regulates apoptosis. Broadly, our results reveal an alternative splicing network linking cell-cycle control to apoptosis. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20705336      PMCID: PMC2924962          DOI: 10.1016/j.cell.2010.07.019

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  39 in total

Review 1.  Global analysis of mRNA splicing.

Authors:  Michael J Moore; Pamela A Silver
Journal:  RNA       Date:  2007-12-14       Impact factor: 4.942

Review 2.  The spliceosome: design principles of a dynamic RNP machine.

Authors:  Markus C Wahl; Cindy L Will; Reinhard Lührmann
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

3.  A quantitative atlas of mitotic phosphorylation.

Authors:  Noah Dephoure; Chunshui Zhou; Judit Villén; Sean A Beausoleil; Corey E Bakalarski; Stephen J Elledge; Steven P Gygi
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-31       Impact factor: 11.205

4.  Heterogeneous nuclear ribonucleoprotein F/H proteins modulate the alternative splicing of the apoptotic mediator Bcl-x.

Authors:  Daniel Garneau; Timothée Revil; Jean-François Fisette; Benoit Chabot
Journal:  J Biol Chem       Date:  2005-04-18       Impact factor: 5.157

5.  Role of the modular domains of SR proteins in subnuclear localization and alternative splicing specificity.

Authors:  J F Cáceres; T Misteli; G R Screaton; D L Spector; A R Krainer
Journal:  J Cell Biol       Date:  1997-07-28       Impact factor: 10.539

Review 6.  Regulation of apoptosis by alternative pre-mRNA splicing.

Authors:  Christian Schwerk; Klaus Schulze-Osthoff
Journal:  Mol Cell       Date:  2005-07-01       Impact factor: 17.970

7.  The Ipl1/Aurora kinase family: methods of inhibition and functional analysis in mammalian cells.

Authors:  Claire Ditchfield; Nicholas Keen; Stephen S Taylor
Journal:  Methods Mol Biol       Date:  2005

Review 8.  Diagnosing and exploiting cancer's addiction to blocks in apoptosis.

Authors:  Anthony G Letai
Journal:  Nat Rev Cancer       Date:  2008-02       Impact factor: 60.716

9.  Antagonistic effects of the SRp30c protein and cryptic 5' splice sites on the alternative splicing of the apoptotic regulator Bcl-x.

Authors:  Philippe Cloutier; Johanne Toutant; Lulzim Shkreta; Serge Goekjian; Timothée Revil; Benoit Chabot
Journal:  J Biol Chem       Date:  2008-06-05       Impact factor: 5.157

10.  Whole genome functional analysis identifies novel components required for mitotic spindle integrity in human cells.

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Journal:  Genome Biol       Date:  2008-02-26       Impact factor: 13.583

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  165 in total

1.  Genome-wide RNAi screen discovers functional coupling of alternative splicing and cell cycle control to apoptosis regulation.

Authors:  Qingqing Wang; Pamela A Silver
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

Review 2.  MECHANISMS IN ENDOCRINOLOGY: Alternative splicing: the new frontier in diabetes research.

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Review 3.  Systems approaches to molecular cancer diagnostics.

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Journal:  Discov Med       Date:  2010-12       Impact factor: 2.970

4.  Proteins associated with the exon junction complex also control the alternative splicing of apoptotic regulators.

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5.  Expression of PYCARD gene transcript variant mRNA in peripheral blood mononuclear cells of primary gout patients with different Chinese medicine syndromes.

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6.  UHM-ULM interactions in the RBM39-U2AF65 splicing-factor complex.

Authors:  Galina A Stepanyuk; Pedro Serrano; Eigen Peralta; Carol L Farr; Herbert L Axelrod; Michael Geralt; Debanu Das; Hsiu-Ju Chiu; Lukasz Jaroszewski; Ashley M Deacon; Scott A Lesley; Marc-André Elsliger; Adam Godzik; Ian A Wilson; Kurt Wüthrich; Daniel R Salomon; James R Williamson
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-03-24       Impact factor: 7.652

7.  Integrative analysis of many RNA-seq datasets to study alternative splicing.

Authors:  Wenyuan Li; Chao Dai; Shuli Kang; Xianghong Jasmine Zhou
Journal:  Methods       Date:  2014-02-28       Impact factor: 3.608

Review 8.  Association of survivin splice variants with prognosis and treatment of breast cancer.

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Journal:  World J Clin Oncol       Date:  2014-12-10

9.  Emetine regulates the alternative splicing of caspase 9 in tumor cells.

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Review 10.  Regulation of splicing by SR proteins and SR protein-specific kinases.

Authors:  Zhihong Zhou; Xiang-Dong Fu
Journal:  Chromosoma       Date:  2013-03-24       Impact factor: 4.316

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