Literature DB >> 20701681

An integrative approach to species discovery in odonates: from character-based DNA barcoding to ecology.

Sandra Damm1, Bernd Schierwater, Heike Hadrys.   

Abstract

Modern taxonomy requires an analytical approach incorporating all lines of evidence into decision-making. Such an approach can enhance both species identification and species discovery. The character-based DNA barcode method provides a molecular data set that can be incorporated into classical taxonomic data such that the discovery of new species can be made in an analytical framework that includes multiple sources of data. We here illustrate such a corroborative framework in a dragonfly model system that permits the discovery of two new, but visually cryptic species. In the African dragonfly genus Trithemis three distinct genetic clusters can be detected which could not be identified by using classical taxonomic characters. In order to test the hypothesis of two new species, DNA-barcodes from different sequence markers (ND1 and COI) were combined with morphological, ecological and biogeographic data sets. Phylogenetic analyses and incorporation of all data sets into a scheme called taxonomic circle highly supports the hypothesis of two new species. Our case study suggests an analytical approach to modern taxonomy that integrates data sets from different disciplines, thereby increasing the ease and reliability of both species discovery and species assignment.
© 2010 Blackwell Publishing Ltd.

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Year:  2010        PMID: 20701681     DOI: 10.1111/j.1365-294X.2010.04720.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  14 in total

1.  Pay Attention to the Overlooked Cryptic Diversity in Existing Barcoding Data: the Case of Mollusca with Character-Based DNA Barcoding.

Authors:  Shanmei Zou; Qi Li
Journal:  Mar Biotechnol (NY)       Date:  2016-02-22       Impact factor: 3.619

2.  Machine learning approaches outperform distance- and tree-based methods for DNA barcoding of Pterocarpus wood.

Authors:  Tuo He; Lichao Jiao; Alex C Wiedenhoeft; Yafang Yin
Journal:  Planta       Date:  2019-03-01       Impact factor: 4.116

3.  Coverage and quality of DNA barcode references for Central and Northern European Odonata.

Authors:  Matthias Geiger; Stephan Koblmüller; Giacomo Assandri; Andreas Chovanec; Torbjørn Ekrem; Iris Fischer; Andrea Galimberti; Michał Grabowski; Elisabeth Haring; Axel Hausmann; Lars Hendrich; Stefan Koch; Tomasz Mamos; Udo Rothe; Björn Rulik; Tomasz Rewicz; Marcia Sittenthaler; Elisabeth Stur; Grzegorz Tończyk; Lukas Zangl; Jerome Moriniere
Journal:  PeerJ       Date:  2021-05-03       Impact factor: 2.984

4.  DNA barcoding of recently diverged species: relative performance of matching methods.

Authors:  Robin van Velzen; Emanuel Weitschek; Giovanni Felici; Freek T Bakker
Journal:  PLoS One       Date:  2012-01-17       Impact factor: 3.240

5.  Comparing the usefulness of distance, monophyly and character-based DNA barcoding methods in species identification: a case study of neogastropoda.

Authors:  Shanmei Zou; Qi Li; Lingfeng Kong; Hong Yu; Xiaodong Zheng
Journal:  PLoS One       Date:  2011-10-24       Impact factor: 3.240

6.  Monophyly, distance and character-based multigene barcoding reveal extraordinary cryptic diversity in Nassarius: a complex and dangerous community.

Authors:  Shanmei Zou; Qi Li; Lingfeng Kong
Journal:  PLoS One       Date:  2012-10-11       Impact factor: 3.240

7.  Deep sympatric mtDNA divergence in the autumnal moth (Epirrita autumnata).

Authors:  Kjersti S Kvie; Silje Hogner; Leif Aarvik; Jan T Lifjeld; Arild Johnsen
Journal:  Ecol Evol       Date:  2012-12-14       Impact factor: 2.912

8.  Integrative taxonomy and molecular phylogeny of genus Aplysina (Demospongiae: Verongida) from Mexican Pacific.

Authors:  José Antonio Cruz-Barraza; José Luis Carballo; Axayacatl Rocha-Olivares; Hermann Ehrlich; Martin Hog
Journal:  PLoS One       Date:  2012-08-13       Impact factor: 3.240

9.  A retrospective approach to testing the DNA barcoding method.

Authors:  David G Chapple; Peter A Ritchie
Journal:  PLoS One       Date:  2013-11-11       Impact factor: 3.240

10.  DNA barcodes for the fishes of the Narmada, one of India's longest rivers.

Authors:  Gulab Dattarao Khedkar; Rahul Jamdade; Suresh Naik; Lior David; David Haymer
Journal:  PLoS One       Date:  2014-07-03       Impact factor: 3.240

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