Literature DB >> 20700832

Specific (15)N, NH correlations for residues in(15) N, (13)C and fractionally deuterated proteins that immediately follow methyl-containing amino acids.

D R Muhandiram1, P E Johnson, D Yang, O Zhang, L P McIntosh, L E Kay.   

Abstract

A triple-resonance pulse scheme is described which records(15)N, NH correlations of residues that immediately follow amethyl-containing amino acid. The experiment makes use of a(15)N, (13)C and fractionally deuterated proteinsample and selects for CH(2)D methyl types. The experiment isthus useful in the early stages of the sequential assignment process as wellas for the confirmation of backbone (15)N, NH chemical shiftassignments at later stages of data analysis. A simple modification of thesequence also allows the measurement of methyl side-chain dynamics. This isparticularly useful for studying side-chain dynamic properties in partiallyunfolded and unfolded proteins where the resolution of aliphatic carbon andproton chemical shifts is limited compared to that of amide nitrogens.

Entities:  

Year:  1997        PMID: 20700832     DOI: 10.1023/A:1018301818803

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  15 in total

1.  An approach to global fold determination using limited NMR data from larger proteins selectively protonated at specific residue types.

Authors:  B O Smith; Y Ito; A Raine; S Teichmann; L Ben-Tovim; D Nietlispach; R W Broadhurst; T Terada; M Kelly; H Oschkinat; T Shibata; S Yokoyama; E D Laue
Journal:  J Biomol NMR       Date:  1996-10       Impact factor: 2.835

2.  Interaction of soluble cellooligosaccharides with the N-terminal cellulose-binding domain of Cellulomonas fimi CenC 2. NMR and ultraviolet absorption spectroscopy.

Authors:  P E Johnson; P Tomme; M D Joshi; L P McIntosh
Journal:  Biochemistry       Date:  1996-11-05       Impact factor: 3.162

3.  Amino-acid-type identification for deuterated proteins with a beta-carbon-edited HNCOCACB experiment.

Authors:  V Dötsch; H Matsuo; G Wagner
Journal:  J Magn Reson B       Date:  1996-07

4.  Two-dimensional nuclear magnetic resonance method for identifying the HN/N signals of amino-acid residues following glycine.

Authors:  K Gehring; E Guittet
Journal:  J Magn Reson B       Date:  1995-11

5.  Amino-acid-type-selective triple-resonance experiments.

Authors:  V Dötsch; R E Oswald; G Wagner
Journal:  J Magn Reson B       Date:  1996-01

6.  Triple-resonance NOESY-based experiments with improved spectral resolution: applications to structural characterization of unfolded, partially folded and folded proteins.

Authors:  O Zhang; J D Forman-Kay; D Shortle; L E Kay
Journal:  J Biomol NMR       Date:  1997-02       Impact factor: 2.835

7.  Characterizing the use of perdeuteration in NMR studies of large proteins: 13C, 15N and 1H assignments of human carbonic anhydrase II.

Authors:  R A Venters; B T Farmer; C A Fierke; L D Spicer
Journal:  J Mol Biol       Date:  1996-12-20       Impact factor: 5.469

8.  Selective methyl group protonation of perdeuterated proteins.

Authors:  M K Rosen; K H Gardner; R C Willis; W E Parris; T Pawson; L E Kay
Journal:  J Mol Biol       Date:  1996-11-15       Impact factor: 5.469

9.  Side chain and backbone assignments in isotopically labeled proteins from two heteronuclear triple resonance experiments.

Authors:  T M Logan; E T Olejniczak; R X Xu; S W Fesik
Journal:  FEBS Lett       Date:  1992-12-21       Impact factor: 4.124

10.  Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

Authors:  S Grzesiek; A Bax
Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

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  4 in total

1.  Data requirements for reliable chemical shift assignments in deuterated proteins.

Authors:  T Kevin Hitchens; Scott A McCallum; Gordon S Rule
Journal:  J Biomol NMR       Date:  2003-01       Impact factor: 2.835

2.  New amino acid residue type identification experiments valid for protonated and deuterated proteins.

Authors:  David Pantoja-Uceda; Jorge Santoro
Journal:  J Biomol NMR       Date:  2012-09-04       Impact factor: 2.835

3.  Editing and diagonal peak suppression in three-dimensional HCCH protein NMR correlation experiments.

Authors:  A Meissner; O W Sørensen
Journal:  J Biomol NMR       Date:  2001-01       Impact factor: 2.835

4.  Model selection for the interpretation of protein side chain methyl dynamics.

Authors:  Wing-Yiu Choy; Lewis E Kay
Journal:  J Biomol NMR       Date:  2003-04       Impact factor: 2.835

  4 in total

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