Literature DB >> 11246856

Editing and diagonal peak suppression in three-dimensional HCCH protein NMR correlation experiments.

A Meissner1, O W Sørensen.   

Abstract

A novel three-dimensional (3D) HCCH NMR experiment is introduced. It involves 13C-13C COSY or TOCSY coherence transfer plus two independent editing steps according to the number of protons attached to the individual carbons before and after the 13C-13C homonuclear mixing. This double editing leads to simplification of HCCH protein side chain spectra that otherwise are prone to spectral overlap. Another interesting feature is amino acid selectivity, i.e. that the presence of certain correlations in a doubly edited HCCH subspectrum gives a clue as to assignment to a particular subgroup of amino acids or segments thereof. Finally, the selection of two different multiplicities in the two editing steps leads to diagonal peak suppression in the 1H-1H (3D spectrum recorded with two 1H and one 13C dimension) or the 13C-13C (3D spectrum recorded with one 1H and two 13C dimensions) two-dimensional projection. The new experiment is demonstrated using a 13C,15N-labeled protein sample, chymotrypsin inhibitor 2, at 500 MHz.

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Year:  2001        PMID: 11246856     DOI: 10.1023/a:1008359912748

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  12 in total

1.  MUSIC in triple-resonance experiments: amino acid type-selective (1)H-(15)N correlations

Authors: 
Journal:  J Magn Reson       Date:  1999-11       Impact factor: 2.229

2.  Three-dimensional protein NMR TROSY-type (15)N-resolved (1)H(N)-(1)H(N) NOESY spectra with diagonal peak suppression.

Authors:  A Meissner; O W SŁrensen
Journal:  J Magn Reson       Date:  2000-01       Impact factor: 2.229

3.  Amino-acid-type identification for deuterated proteins with a beta-carbon-edited HNCOCACB experiment.

Authors:  V Dötsch; H Matsuo; G Wagner
Journal:  J Magn Reson B       Date:  1996-07

4.  H2NCO-E.COSY, a simple method for the sterospecific assignment of side-chain amide protons in proteins.

Authors:  F Löhr; H Rüterjans
Journal:  J Magn Reson       Date:  1997-01       Impact factor: 2.229

5.  Context dependence of protein secondary structure formation: the three-dimensional structure and stability of a hybrid between chymotrypsin inhibitor 2 and helix E from subtilisin Carlsberg.

Authors:  P Osmark; P Sørensen; F M Poulsen
Journal:  Biochemistry       Date:  1993-10-19       Impact factor: 3.162

6.  Suppression of diagonal peaks in three-dimensional protein NMR TROSY-type HCCH correlation experiments.

Authors:  A Meissner; O W Sorensen
Journal:  J Magn Reson       Date:  2000-05       Impact factor: 2.229

7.  The 2D NMR experiments H(C)CO2 and HCCO2 for assignment and pH titration of carboxylate groups in uniformly 15N/13C-labeled proteins.

Authors:  M Pellecchia; H Iwai; T Szyperski; K Wüthrich
Journal:  J Magn Reson       Date:  1997-01       Impact factor: 2.229

8.  Phase labeling of C-H and C-C spin-system topologies: application in constant-time PFG-CBCA(CO)NH experiments for discriminating amino acid spin-system types.

Authors:  C B Rios; W Feng; M Tashiro; Z Shang; G T Montelione
Journal:  J Biomol NMR       Date:  1996-10       Impact factor: 2.835

9.  Selective correlation of amide groups to glycine alpha protons and of arginine guanidine groups to delta protons in proteins by multiple quantum spectroscopy.

Authors:  R Bazzo; D O Cicero; G Barbato
Journal:  J Magn Reson       Date:  1999-01       Impact factor: 2.229

10.  A 4D HCCH-TOCSY experiment for assigning the side chain 1H and 13C resonances of proteins.

Authors:  E T Olejniczak; R X Xu; S W Fesik
Journal:  J Biomol NMR       Date:  1992-11       Impact factor: 2.835

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  1 in total

1.  A general method for diagonal peak suppression in homonuclear correlated NMR spectra by spatially and frequency selective pulses.

Authors:  Simon Glanzer; Evelyne Schrank; Klaus Zangger
Journal:  J Magn Reson       Date:  2013-04-22       Impact factor: 2.229

  1 in total

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