Literature DB >> 20693999

Spontaneous network activity visualized by ultrasensitive Ca(2+) indicators, yellow Cameleon-Nano.

Kazuki Horikawa1, Yoshiyuki Yamada, Tomoki Matsuda, Kentarou Kobayashi, Mitsuhiro Hashimoto, Toru Matsu-ura, Atsushi Miyawaki, Takayuki Michikawa, Katsuhiko Mikoshiba, Takeharu Nagai.   

Abstract

We report ultrasensitive Ca(2+) indicators, yellow cameleon-Nano (YC-Nano), developed by engineering the Ca(2+)-sensing domain of a genetically encoded Ca(2+) indicator, YC2.60 or YC3.60. Their high Ca(2+) affinities (K(d) = 15-140 nM) and large signal change (1,450%) enabled detection of subtle Ca(2+) transients associated with intercellular signaling dynamics and neuronal activity, even in 100,000-cell networks. These indicators will be useful for studying information processing in living multicellular networks.

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Year:  2010        PMID： 20693999     DOI： 10.1038/nmeth.1488

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


  21 in total

1.  Expanded dynamic range of fluorescent indicators for Ca(2+) by circularly permuted yellow fluorescent proteins.

Authors:  Takeharu Nagai; Shuichi Yamada; Takashi Tominaga; Michinori Ichikawa; Atsushi Miyawaki
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-09       Impact factor: 11.205

2.  Fluorescence changes of genetic calcium indicators and OGB-1 correlated with neural activity and calcium in vivo and in vitro.

Authors:  Thomas Hendel; Marco Mank; Bettina Schnell; Oliver Griesbeck; Alexander Borst; Dierk F Reiff
Journal:  J Neurosci       Date:  2008-07-16       Impact factor: 6.167

3.  Spectroscopic characterization of a high-affinity calmodulin-target peptide hybrid molecule.

Authors:  S R Martin; P M Bayley; S E Brown; T Porumb; M Zhang; M Ikura
Journal:  Biochemistry       Date:  1996-03-19       Impact factor: 3.162

4.  Measurement of cytosolic free Ca2+ with quin2.

Authors:  R Tsien; T Pozzan
Journal:  Methods Enzymol       Date:  1989       Impact factor: 1.600

Review 5.  Chemical calcium indicators.

Authors:  R Madelaine Paredes; Julie C Etzler; Lora Talley Watts; Wei Zheng; James D Lechleiter
Journal:  Methods       Date:  2008-10-16       Impact factor: 3.608

6.  Imaging calcium concentration dynamics in small neuronal compartments.

Authors:  Ryohei Yasuda; Esther A Nimchinsky; Volker Scheuss; Thomas A Pologruto; Thomas G Oertner; Bernardo L Sabatini; Karel Svoboda
Journal:  Sci STKE       Date:  2004-02-03

7.  A simple method for the accurate determination of free [Ca] in Ca-EGTA solutions.

Authors:  D M Bers
Journal:  Am J Physiol       Date:  1982-05

8.  Single-spike detection in vitro and in vivo with a genetic Ca2+ sensor.

Authors:  Damian J Wallace; Stephan Meyer zum Alten Borgloh; Simone Astori; Ying Yang; Melanie Bausen; Sebastian Kügler; Amy E Palmer; Roger Y Tsien; Rolf Sprengel; Jason N D Kerr; Winfried Denk; Mazahir T Hasan
Journal:  Nat Methods       Date:  2008-09       Impact factor: 28.547

9.  A genetically encoded calcium indicator for chronic in vivo two-photon imaging.

Authors:  Marco Mank; Alexandre Ferrão Santos; Stephan Direnberger; Thomas D Mrsic-Flogel; Sonja B Hofer; Valentin Stein; Thomas Hendel; Dierk F Reiff; Christiaan Levelt; Alexander Borst; Tobias Bonhoeffer; Mark Hübener; Oliver Griesbeck
Journal:  Nat Methods       Date:  2008-09       Impact factor: 28.547

10.  Cytosolic inositol 1,4,5-trisphosphate dynamics during intracellular calcium oscillations in living cells.

Authors:  Toru Matsu-ura; Takayuki Michikawa; Takafumi Inoue; Atsushi Miyawaki; Manabu Yoshida; Katsuhiko Mikoshiba
Journal:  J Cell Biol       Date:  2006-06-05       Impact factor: 10.539
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  123 in total

1.  Imaging protein activity in live embryos using fluorescence resonance energy transfer biosensors.

Authors:  Elena Kardash; Jan Bandemer; Erez Raz
Journal:  Nat Protoc       Date:  2011-11-03       Impact factor: 13.491

2.  Optically monitoring voltage in neurons by photo-induced electron transfer through molecular wires.

Authors:  Evan W Miller; John Y Lin; E Paxon Frady; Paul A Steinbach; William B Kristan; Roger Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-24       Impact factor: 11.205

3.  Correlating calcium binding, Förster resonance energy transfer, and conformational change in the biosensor TN-XXL.

Authors:  Anselm Geiger; Luigi Russo; Thomas Gensch; Thomas Thestrup; Stefan Becker; Karl-Peter Hopfner; Christian Griesinger; Gregor Witte; Oliver Griesbeck
Journal:  Biophys J       Date:  2012-05-15       Impact factor: 4.033

4.  Optimized ratiometric calcium sensors for functional in vivo imaging of neurons and T lymphocytes.

Authors:  Thomas Thestrup; Julia Litzlbauer; Ingo Bartholomäus; Marsilius Mues; Luigi Russo; Hod Dana; Yuri Kovalchuk; Yajie Liang; Georgios Kalamakis; Yvonne Laukat; Stefan Becker; Gregor Witte; Anselm Geiger; Taylor Allen; Lawrence C Rome; Tsai-Wen Chen; Douglas S Kim; Olga Garaschuk; Christian Griesinger; Oliver Griesbeck
Journal:  Nat Methods       Date:  2014-01-05       Impact factor: 28.547

5.  Behaviour-dependent recruitment of long-range projection neurons in somatosensory cortex.

Authors:  Jerry L Chen; Stefano Carta; Joana Soldado-Magraner; Bernard L Schneider; Fritjof Helmchen
Journal:  Nature       Date:  2013-06-23       Impact factor: 49.962

6.  Online correction of licking-induced brain motion during two-photon imaging with a tunable lens.

Authors:  Jerry L Chen; Oliver A Pfäffli; Fabian F Voigt; David J Margolis; Fritjof Helmchen
Journal:  J Physiol       Date:  2013-08-12       Impact factor: 5.182

7.  Live Cell Imaging with R-GECO1 Sheds Light on flg22- and Chitin-Induced Transient [Ca(2+)]cyt Patterns in Arabidopsis.

Authors:  Nana F Keinath; Rainer Waadt; Rik Brugman; Julian I Schroeder; Guido Grossmann; Karin Schumacher; Melanie Krebs
Journal:  Mol Plant       Date:  2015-05-19       Impact factor: 13.164

8.  Ventrolateral Striatal Medium Spiny Neurons Positively Regulate Food-Incentive, Goal-Directed Behavior Independently of D1 and D2 Selectivity.

Authors:  Akiyo Natsubori; Iku Tsutsui-Kimura; Hiroshi Nishida; Youcef Bouchekioua; Hiroshi Sekiya; Motokazu Uchigashima; Masahiko Watanabe; Alban de Kerchove d'Exaerde; Masaru Mimura; Norio Takata; Kenji F Tanaka
Journal:  J Neurosci       Date:  2017-02-06       Impact factor: 6.167

Review 9.  Genetically encoded optical indicators for the analysis of neuronal circuits.

Authors:  Thomas Knöpfel
Journal:  Nat Rev Neurosci       Date:  2012-08-30       Impact factor: 34.870

Review 10.  Genetically encoded indicators of neuronal activity.

Authors:  Michael Z Lin; Mark J Schnitzer
Journal:  Nat Neurosci       Date:  2016-08-26       Impact factor: 24.884
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