Literature DB >> 18929663

Chemical calcium indicators.

R Madelaine Paredes1, Julie C Etzler, Lora Talley Watts, Wei Zheng, James D Lechleiter.   

Abstract

Our understanding of the underlying mechanisms of Ca2+ signaling as well as our appreciation for its ubiquitous role in cellular processes has been rapidly advanced, in large part, due to the development of fluorescent Ca2+ indicators. In this chapter, we discuss some of the most common chemical Ca2+ indicators that are widely used for the investigation of intracellular Ca2+ signaling. Advantages, limitations and relevant procedures will be presented for each dye including their spectral qualities, dissociation constants, chemical forms, loading methods and equipment for optimal imaging. Chemical indicators now available allow for intracellular Ca2+ detection over a very large range (<50 nM to >50 microM). High affinity indicators can be used to quantify Ca2+ levels in the cytosol while lower affinity indicators can be optimized for measuring Ca2+ in subcellular compartments with higher concentrations. Indicators can be classified into either single wavelength or ratiometric dyes. Both classes require specific lasers, filters, and/or detection methods that are dependent upon their spectral properties and both classes have advantages and limitations. Single wavelength indicators are generally very bright and optimal for Ca2+ detection when more than one fluorophore is being imaged. Ratiometric indicators can be calibrated very precisely and they minimize the most common problems associated with chemical Ca2+ indicators including uneven dye loading, leakage, photobleaching, and changes in cell volume. Recent technical advances that permit in vivo Ca2+ measurements will also be discussed.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18929663      PMCID: PMC2666335          DOI: 10.1016/j.ymeth.2008.09.025

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  103 in total

1.  Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex.

Authors:  Kenichi Ohki; Sooyoung Chung; Yeang H Ch'ng; Prakash Kara; R Clay Reid
Journal:  Nature       Date:  2005-01-19       Impact factor: 49.962

2.  Spatially organised mitochondrial calcium uptake through a novel pathway in chick neurones.

Authors:  William Coatesworth; Stephen Bolsover
Journal:  Cell Calcium       Date:  2005-12-09       Impact factor: 6.817

3.  Single-cell and subcellular measurement of intracellular Ca2+ concentration.

Authors:  Anthony J Morgan; Andrew P Thomas
Journal:  Methods Mol Biol       Date:  2006

4.  Measurement of free [Ca2+] changes in agonist-sensitive internal stores using compartmentalized fluorescent indicators.

Authors:  Aldebaran M Hofer
Journal:  Methods Mol Biol       Date:  2006

5.  Ca2+ blinks: rapid nanoscopic store calcium signaling.

Authors:  Didier X P Brochet; Dongmei Yang; Alessandro Di Maio; W Jonathan Lederer; Clara Franzini-Armstrong; Heping Cheng
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-14       Impact factor: 11.205

6.  Live-cell imaging methods for the study of vagal afferents within the nucleus of the solitary tract.

Authors:  Richard C Rogers; Jason S Nasse; Gerlinda E Hermann
Journal:  J Neurosci Methods       Date:  2005-08-15       Impact factor: 2.390

7.  Multiple ryanodine receptor subtypes and heterogeneous ryanodine receptor-gated Ca2+ stores in pulmonary arterial smooth muscle cells.

Authors:  Xiao-Ru Yang; Mo-Jun Lin; Kay-Pong Yip; Loice H Jeyakumar; Sidney Fleischer; George P H Leung; James S K Sham
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2005-04-29       Impact factor: 5.464

8.  Sulforhodamine 101 as a specific marker of astroglia in the neocortex in vivo.

Authors:  Axel Nimmerjahn; Frank Kirchhoff; Jason N D Kerr; Fritjof Helmchen
Journal:  Nat Methods       Date:  2004-09-29       Impact factor: 28.547

9.  Confocal imaging of [Ca2+] in cellular organelles by SEER, shifted excitation and emission ratioing of fluorescence.

Authors:  Bradley S Launikonis; Jingsong Zhou; Leandro Royer; Thomas R Shannon; Gustavo Brum; Eduardo Ríos
Journal:  J Physiol       Date:  2005-06-09       Impact factor: 5.182

10.  Optical single-channel recording by imaging Ca2+ flux through individual ion channels: theoretical considerations and limits to resolution.

Authors:  Jianwei Shuai; Ian Parker
Journal:  Cell Calcium       Date:  2005-04       Impact factor: 6.817

View more
  176 in total

Review 1.  Elusive equilibrium: the challenge of interpreting receptor pharmacology using calcium assays.

Authors:  Steven J Charlton; Georges Vauquelin
Journal:  Br J Pharmacol       Date:  2010-11       Impact factor: 8.739

2.  Optical sensors for measuring dynamic changes of cytosolic metabolite levels in yeast.

Authors:  Clara Bermejo; Farzad Haerizadeh; Hitomi Takanaga; Diane Chermak; Wolf B Frommer
Journal:  Nat Protoc       Date:  2011-10-27       Impact factor: 13.491

3.  Dynamics of the calcium ion level in rat hepatocytes primary cultures and its age-related changes.

Authors:  A Yu Bespyatykh; O V Burlakova; V A Golichenkov
Journal:  Dokl Biol Sci       Date:  2012-01-07

Review 4.  Probing heterotrimeric G protein activation: applications to biased ligands.

Authors:  Colette Denis; Aude Saulière; Segolene Galandrin; Jean-Michel Sénard; Céline Galés
Journal:  Curr Pharm Des       Date:  2012       Impact factor: 3.116

5.  Excitation spectra and brightness optimization of two-photon excited probes.

Authors:  Jörg Mütze; Vijay Iyer; John J Macklin; Jennifer Colonell; Bill Karsh; Zdeněk Petrášek; Petra Schwille; Loren L Looger; Luke D Lavis; Timothy D Harris
Journal:  Biophys J       Date:  2012-02-21       Impact factor: 4.033

Review 6.  Imaging calcium signals in vivo: a powerful tool in physiology and pharmacology.

Authors:  James T Russell
Journal:  Br J Pharmacol       Date:  2011-08       Impact factor: 8.739

7.  Spontaneous network activity visualized by ultrasensitive Ca(2+) indicators, yellow Cameleon-Nano.

Authors:  Kazuki Horikawa; Yoshiyuki Yamada; Tomoki Matsuda; Kentarou Kobayashi; Mitsuhiro Hashimoto; Toru Matsu-ura; Atsushi Miyawaki; Takayuki Michikawa; Katsuhiko Mikoshiba; Takeharu Nagai
Journal:  Nat Methods       Date:  2010-08-08       Impact factor: 28.547

8.  Monitoring Endoplasmic Reticulum Calcium Homeostasis Using a Gaussia Luciferase SERCaMP.

Authors:  Mark J Henderson; Emily S Wires; Kathleen A Trychta; Xiaokang Yan; Brandon K Harvey
Journal:  J Vis Exp       Date:  2015-09-06       Impact factor: 1.355

9.  P2Y1R-initiated, IP3R-dependent stimulation of astrocyte mitochondrial metabolism reduces and partially reverses ischemic neuronal damage in mouse.

Authors:  Wei Zheng; Lora Talley Watts; Deborah M Holstein; Jimmy Wewer; James D Lechleiter
Journal:  J Cereb Blood Flow Metab       Date:  2013-01-16       Impact factor: 6.200

10.  Rapid stimulus-evoked astrocyte Ca2+ elevations and hemodynamic responses in mouse somatosensory cortex in vivo.

Authors:  Barbara Lykke Lind; Alexey R Brazhe; Sanne Barsballe Jessen; Florence C C Tan; Martin J Lauritzen
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-11       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.