Literature DB >> 20682243

Crystallizing transmembrane peptides in lipidic mesophases.

Nicole Höfer1, David Aragão, Martin Caffrey.   

Abstract

Structure determination of membrane proteins by crystallographic means has been facilitated by crystallization in lipidic mesophases. It has been suggested, however, that this so-called in meso method, as originally implemented, would not apply to small protein targets having </=4 transmembrane crossings. In our study, the hypothesis that the inherent flexibility of the mesophase would enable crystallogenesis of small proteins was tested using a transmembrane pentadecapeptide, linear gramicidin, which produced structure-grade crystals. This result suggests that the in meso method should be considered as a viable means for high-resolution structure determination of integral membrane peptides, many of which are predicted to be coded for in the human genome. 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20682243      PMCID: PMC2913208          DOI: 10.1016/j.bpj.2010.05.011

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  16 in total

1.  Protein interactions and membrane geometry.

Authors:  Michael Grabe; John Neu; George Oster; Peter Nollert
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

2.  Heterodimer formation and crystal nucleation of gramicidin D.

Authors:  B M Burkhart; R M Gassman; D A Langs; W A Pangborn; W L Duax
Journal:  Biophys J       Date:  1998-11       Impact factor: 4.033

3.  Recent Advances in the High Resolution Structures of Bacterial Channels: Gramicidin A.

Authors: 
Journal:  J Struct Biol       Date:  1998       Impact factor: 2.867

4.  The gramicidin A transmembrane channel: a proposed pi(L,D) helix.

Authors:  D W Urry
Journal:  Proc Natl Acad Sci U S A       Date:  1971-03       Impact factor: 11.205

5.  Structures of gramicidins A, B, and C incorporated into sodium dodecyl sulfate micelles.

Authors:  L E Townsley; W A Tucker; S Sham; J F Hinton
Journal:  Biochemistry       Date:  2001-10-02       Impact factor: 3.162

Review 6.  The Membrane Protein Data Bank.

Authors:  P Raman; V Cherezov; M Caffrey
Journal:  Cell Mol Life Sci       Date:  2006-01       Impact factor: 9.261

Review 7.  G-protein-coupled receptor structures were not built in a day.

Authors:  Tracy M Blois; James U Bowie
Journal:  Protein Sci       Date:  2009-07       Impact factor: 6.725

8.  Crystallizing membrane proteins using lipidic mesophases.

Authors:  Martin Caffrey; Vadim Cherezov
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

9.  Transmembrane protein topology prediction using support vector machines.

Authors:  Timothy Nugent; David T Jones
Journal:  BMC Bioinformatics       Date:  2009-05-26       Impact factor: 3.169

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  22 in total

1.  Host Lipid and Temperature as Important Screening Variables for Crystallizing Integral Membrane Proteins in Lipidic Mesophases. Trials with Diacylglycerol Kinase.

Authors:  Dianfan Li; Syed T A Shah; Martin Caffrey
Journal:  Cryst Growth Des       Date:  2013-07-03       Impact factor: 4.076

2.  Modeling the membrane environment for membrane proteins.

Authors:  Frances Separovic; J Antoinette Killian; Myriam Cotten; David D Busath; Timothy A Cross
Journal:  Biophys J       Date:  2011-04-20       Impact factor: 4.033

3.  Structure of CrgA, a cell division structural and regulatory protein from Mycobacterium tuberculosis, in lipid bilayers.

Authors:  Nabanita Das; Jian Dai; Ivan Hung; Malini R Rajagopalan; Malini R Rajagopalan; Huan-Xiang Zhou; Timothy A Cross
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-29       Impact factor: 11.205

4.  Membrane Protein Crystallization in Lipidic Mesophases. Hosting lipid affects on the crystallization and structure of a transmembrane peptide.

Authors:  Nicole Höfer; David Aragão; Joseph A Lyons; Martin Caffrey
Journal:  Cryst Growth Des       Date:  2011-02-16       Impact factor: 4.076

5.  Surfactant bilayers maintain transmembrane protein activity.

Authors:  Gamal Rayan; Vladimir Adrien; Myriam Reffay; Martin Picard; Arnaud Ducruix; Marc Schmutz; Wladimir Urbach; Nicolas Taulier
Journal:  Biophys J       Date:  2014-09-02       Impact factor: 4.033

6.  Membrane protein structural validation by oriented sample solid-state NMR: diacylglycerol kinase.

Authors:  Dylan T Murray; Conggang Li; F Philip Gao; Huajun Qin; Timothy A Cross
Journal:  Biophys J       Date:  2014-04-15       Impact factor: 4.033

7.  Exploring the in meso crystallization mechanism by characterizing the lipid mesophase microenvironment during the growth of single transmembrane α-helical peptide crystals.

Authors:  Leonie van 't Hag; Konstantin Knoblich; Shane A Seabrook; Nigel M Kirby; Stephen T Mudie; Deborah Lau; Xu Li; Sally L Gras; Xavier Mulet; Matthew E Call; Melissa J Call; Calum J Drummond; Charlotte E Conn
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2016-07-28       Impact factor: 4.226

8.  Solid state NMR: The essential technology for helical membrane protein structural characterization.

Authors:  Timothy A Cross; Vindana Ekanayake; Joana Paulino; Anna Wright
Journal:  J Magn Reson       Date:  2013-12-19       Impact factor: 2.229

9.  Crystallizing Membrane Proteins in Lipidic Mesophases. A Host Lipid Screen.

Authors:  Dianfan Li; Jean Lee; Martin Caffrey
Journal:  Cryst Growth Des       Date:  2011       Impact factor: 4.076

10.  Lipid cubic phase as a membrane mimetic for integral membrane protein enzymes.

Authors:  Dianfan Li; Martin Caffrey
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-09       Impact factor: 11.205

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