Literature DB >> 20681546

Oxidation reactions performed by soluble methane monooxygenase hydroxylase intermediates H(peroxo) and Q proceed by distinct mechanisms.

Christine E Tinberg1, Stephen J Lippard.   

Abstract

Soluble methane monooxygenase is a bacterial enzyme that converts methane to methanol at a carboxylate-bridged diiron center with exquisite control. Because the oxidizing power required for this transformation is demanding, it is not surprising that the enzyme is also capable of hydroxylating and epoxidizing a broad range of hydrocarbon substrates in addition to methane. In this work we took advantage of this promiscuity of the enzyme to gain insight into the mechanisms of action of H(peroxo) and Q, two oxidants that are generated sequentially during the reaction of reduced protein with O(2). Using double-mixing stopped-flow spectroscopy, we investigated the reactions of the two intermediate species with a panel of substrates of varying C-H bond strength. Three classes of substrates were identified according to the rate-determining step in the reaction. We show for the first time that an inverse trend exists between the rate constant of reaction with H(peroxo) and the C-H bond strength of the hydrocarbon examined for those substrates in which C-H bond activation is rate-determining. Deuterium kinetic isotope effects revealed that reactions performed by Q, but probably not H(peroxo), involve extensive quantum mechanical tunneling. This difference sheds light on the observation that H(peroxo) is not a sufficiently potent oxidant to hydroxylate methane, whereas Q can perform this reaction in a facile manner. In addition, the reaction of H(peroxo) with acetonitrile appears to proceed by a distinct mechanism in which a cyanomethide anionic intermediate is generated, bolstering the argument that H(peroxo) is an electrophilic oxidant that operates via two-electron transfer chemistry.

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Year:  2010        PMID: 20681546      PMCID: PMC2935519          DOI: 10.1021/bi1009375

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  46 in total

1.  Kinetics and activation thermodynamics of methane monooxygenase compound Q formation and reaction with substrates.

Authors:  B J Brazeau; J D Lipscomb
Journal:  Biochemistry       Date:  2000-11-07       Impact factor: 3.162

2.  Crystal structure of a bacterial non-haem iron hydroxylase that catalyses the biological oxidation of methane.

Authors:  A C Rosenzweig; C A Frederick; S J Lippard; P Nordlund
Journal:  Nature       Date:  1993-12-09       Impact factor: 49.962

3.  Electron-transfer reactions of the reductase component of soluble methane monooxygenase from Methylococcus capsulatus (Bath).

Authors:  D A Kopp; G T Gassner; J L Blazyk; S J Lippard
Journal:  Biochemistry       Date:  2001-12-11       Impact factor: 3.162

4.  Dioxygen Activation and Methane Hydroxylation by Soluble Methane Monooxygenase: A Tale of Two Irons and Three Proteins A list of abbreviations can be found in Section 7.

Authors:  Maarten Merkx; Daniel A. Kopp; Matthew H. Sazinsky; Jessica L. Blazyk; Jens Müller; Stephen J. Lippard
Journal:  Angew Chem Int Ed Engl       Date:  2001-08-03       Impact factor: 15.336

5.  Large kinetic isotope effects in methane oxidation catalyzed by methane monooxygenase: evidence for C-H bond cleavage in a reaction cycle intermediate.

Authors:  J C Nesheim; J D Lipscomb
Journal:  Biochemistry       Date:  1996-08-06       Impact factor: 3.162

6.  Stopped-flow Fourier transform infrared spectroscopy of nitromethane oxidation by the diiron(IV) intermediate of methane monooxygenase.

Authors:  Mylrajan Muthusamy; Edna A Ambundo; Simon J George; Stephen J Lippard; Roger N F Thorneley
Journal:  J Am Chem Soc       Date:  2003-09-17       Impact factor: 15.419

7.  Methane monooxygenase catalyzed oxygenation of 1,1-dimethylcyclopropane. Evidence for radical and carbocationic intermediates.

Authors:  F Ruzicka; D S Huang; M I Donnelly; P A Frey
Journal:  Biochemistry       Date:  1990-02-20       Impact factor: 3.162

8.  Revisiting the mechanism of dioxygen activation in soluble methane monooxygenase from M. capsulatus (Bath): evidence for a multi-step, proton-dependent reaction pathway.

Authors:  Christine E Tinberg; Stephen J Lippard
Journal:  Biochemistry       Date:  2009-12-29       Impact factor: 3.162

9.  Kinetic isotope effects implicate two electrophilic oxidants in cytochrome p450-catalyzed hydroxylations.

Authors:  Martin Newcomb; David Aebisher; Runnan Shen; R Esala P Chandrasena; Paul F Hollenberg; Minor J Coon
Journal:  J Am Chem Soc       Date:  2003-05-21       Impact factor: 15.419

10.  Regulation of methane monooxygenase catalysis based on size exclusion and quantum tunneling.

Authors:  Hui Zheng; John D Lipscomb
Journal:  Biochemistry       Date:  2006-02-14       Impact factor: 3.162

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  17 in total

Review 1.  Dioxygen Activation by Nonheme Diiron Enzymes: Diverse Dioxygen Adducts, High-Valent Intermediates, and Related Model Complexes.

Authors:  Andrew J Jasniewski; Lawrence Que
Journal:  Chem Rev       Date:  2018-02-05       Impact factor: 60.622

Review 2.  VTST/MT studies of the catalytic mechanism of C-H activation by transition metal complexes with [Cu2(μ-O2)], [Fe2(μ-O2)] and Fe(IV)-O cores based on DFT potential energy surfaces.

Authors:  Yongho Kim; Binh Khanh Mai; Sumin Park
Journal:  J Biol Inorg Chem       Date:  2017-01-16       Impact factor: 3.358

Review 3.  Divergent mechanisms of iron-containing enzymes for hydrocarbon biosynthesis.

Authors:  Courtney E Wise; Job L Grant; Jose A Amaya; Steven C Ratigan; Chun H Hsieh; Olivia M Manley; Thomas M Makris
Journal:  J Biol Inorg Chem       Date:  2016-12-21       Impact factor: 3.358

Review 4.  A tale of two methane monooxygenases.

Authors:  Matthew O Ross; Amy C Rosenzweig
Journal:  J Biol Inorg Chem       Date:  2016-11-22       Impact factor: 3.358

5.  Revisiting the mechanism of dioxygen activation in soluble methane monooxygenase from M. capsulatus (Bath): evidence for a multi-step, proton-dependent reaction pathway.

Authors:  Christine E Tinberg; Stephen J Lippard
Journal:  Biochemistry       Date:  2009-12-29       Impact factor: 3.162

6.  Mechanism for Six-Electron Aryl-N-Oxygenation by the Non-Heme Diiron Enzyme CmlI.

Authors:  Anna J Komor; Brent S Rivard; Ruixi Fan; Yisong Guo; Lawrence Que; John D Lipscomb
Journal:  J Am Chem Soc       Date:  2016-06-03       Impact factor: 15.419

Review 7.  Methane-Oxidizing Enzymes: An Upstream Problem in Biological Gas-to-Liquids Conversion.

Authors:  Thomas J Lawton; Amy C Rosenzweig
Journal:  J Am Chem Soc       Date:  2016-07-19       Impact factor: 15.419

Review 8.  Structure/function correlations over binuclear non-heme iron active sites.

Authors:  Edward I Solomon; Kiyoung Park
Journal:  J Biol Inorg Chem       Date:  2016-07-01       Impact factor: 3.358

9.  A Peroxynitrite Dicopper Complex: Formation via Cu-NO and Cu-O2 Intermediates and Reactivity via O-O Cleavage Chemistry.

Authors:  Rui Cao; Lee Taylor Elrod; Ryan L Lehane; Eunsuk Kim; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2016-12-02       Impact factor: 15.419

10.  Unprecedented (μ-1,1-Peroxo)diferric Structure for the Ambiphilic Orange Peroxo Intermediate of the Nonheme N-Oxygenase CmlI.

Authors:  Andrew J Jasniewski; Anna J Komor; John D Lipscomb; Lawrence Que
Journal:  J Am Chem Soc       Date:  2017-07-19       Impact factor: 15.419

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