Literature DB >> 24714879

Gene activation and cell fate control in plants: a chromatin perspective.

Julia Engelhorn1, Robert Blanvillain, Cristel C Carles.   

Abstract

In plants, environment-adaptable organogenesis extends throughout the lifespan, and iterative development requires repetitive rounds of activation and repression of several sets of genes. Eukaryotic genome compaction into chromatin forms a physical barrier for transcription; therefore, induction of gene expression requires alteration in chromatin structure. One of the present great challenges in molecular and developmental biology is to understand how chromatin is brought from a repressive to permissive state on specific loci and in a very specific cluster of cells, as well as how this state is further maintained and propagated through time and cell division in a cell lineage. In this review, we report recent discoveries implementing our knowledge on chromatin dynamics that modulate developmental gene expression. We also discuss how new data sets highlight plant specificities, likely reflecting requirement for a highly dynamic chromatin.

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Year:  2014        PMID: 24714879     DOI: 10.1007/s00018-014-1609-0

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  155 in total

Review 1.  The end of innocence: flowering networks explode in complexity.

Authors:  David Posé; Levi Yant; Markus Schmid
Journal:  Curr Opin Plant Biol       Date:  2011-10-03       Impact factor: 7.834

Review 2.  Missing links between histones and RNA Pol II arising from SAND?

Authors:  Cristel C Carles; Jennifer C Fletcher
Journal:  Epigenetics       Date:  2010-07-01       Impact factor: 4.528

3.  Genome-wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in Arabidopsis.

Authors:  Wenli Zhang; Tao Zhang; Yufeng Wu; Jiming Jiang
Journal:  Plant Cell       Date:  2012-07-05       Impact factor: 11.277

Review 4.  The role of chromatin during transcription.

Authors:  Bing Li; Michael Carey; Jerry L Workman
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 5.  Making copies of chromatin: the challenge of nucleosomal organization and epigenetic information.

Authors:  Armelle Corpet; Geneviève Almouzni
Journal:  Trends Cell Biol       Date:  2008-11-20       Impact factor: 20.808

6.  Transcription-dependence of histone H3 lysine 27 trimethylation at the Arabidopsis polycomb target gene FLC.

Authors:  Diana Mihaela Buzas; Masumi Robertson; E Jean Finnegan; Chris A Helliwell
Journal:  Plant J       Date:  2011-01-31       Impact factor: 6.417

7.  TrxG and PcG proteins but not methylated histones remain associated with DNA through replication.

Authors:  Svetlana Petruk; Yurii Sedkov; Danika M Johnston; Jacob W Hodgson; Kathryn L Black; Sina K Kovermann; Samantha Beck; Eli Canaani; Hugh W Brock; Alexander Mazo
Journal:  Cell       Date:  2012-08-23       Impact factor: 41.582

8.  Dynamic regulation of H3K27 trimethylation during Arabidopsis differentiation.

Authors:  Marcel Lafos; Phillip Kroll; Mareike L Hohenstatt; Frazer L Thorpe; Oliver Clarenz; Daniel Schubert
Journal:  PLoS Genet       Date:  2011-04-07       Impact factor: 5.917

9.  A polycomb group protein is retained at specific sites on chromatin in mitosis.

Authors:  Nicole E Follmer; Ajazul H Wani; Nicole J Francis
Journal:  PLoS Genet       Date:  2012-12-20       Impact factor: 5.917

10.  Reprogramming of H3K27me3 is critical for acquisition of pluripotency from cultured Arabidopsis tissues.

Authors:  Chongsheng He; Xiaofan Chen; Hai Huang; Lin Xu
Journal:  PLoS Genet       Date:  2012-08-23       Impact factor: 5.917

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  6 in total

1.  The many faces of plant chromatin: Meeting summary of the 4th European workshop on plant chromatin 2015, Uppsala, Sweden.

Authors:  Iva Mozgová; Claudia Köhler; Valérie Gaudin; Lars Hennig
Journal:  Epigenetics       Date:  2015       Impact factor: 4.528

2.  Light signaling controls nuclear architecture reorganization during seedling establishment.

Authors:  Clara Bourbousse; Imen Mestiri; Gerald Zabulon; Mickaël Bourge; Fabio Formiggini; Maria A Koini; Spencer C Brown; Paul Fransz; Chris Bowler; Fredy Barneche
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

Review 3.  Epigenetic regulation of rice flowering and reproduction.

Authors:  Jinlei Shi; Aiwu Dong; Wen-Hui Shen
Journal:  Front Plant Sci       Date:  2015-01-28       Impact factor: 5.753

4.  Seed dormancy cycling in Arabidopsis: chromatin remodelling and regulation of DOG1 in response to seasonal environmental signals.

Authors:  Steven Footitt; Kerstin Müller; Allison R Kermode; William E Finch-Savage
Journal:  Plant J       Date:  2014-12-26       Impact factor: 6.417

Review 5.  State of the Art: trxG Factor Regulation of Post-embryonic Plant Development.

Authors:  Jennifer C Fletcher
Journal:  Front Plant Sci       Date:  2017-11-14       Impact factor: 5.753

6.  A SAM oligomerization domain shapes the genomic binding landscape of the LEAFY transcription factor.

Authors:  Camille Sayou; Max H Nanao; Marc Jamin; David Posé; Emmanuel Thévenon; Laura Grégoire; Gabrielle Tichtinsky; Grégoire Denay; Felix Ott; Marta Peirats Llobet; Markus Schmid; Renaud Dumas; François Parcy
Journal:  Nat Commun       Date:  2016-04-21       Impact factor: 14.919

  6 in total

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