Literature DB >> 24280387

Jumonji C domain protein JMJ705-mediated removal of histone H3 lysine 27 trimethylation is involved in defense-related gene activation in rice.

Tiantian Li1, Xiangsong Chen, Xiaochao Zhong, Yu Zhao, Xiaoyun Liu, Shaoli Zhou, Saifeng Cheng, Dao-Xiu Zhou.   

Abstract

Histone methylation is an important epigenetic modification in chromatin function, genome activity, and gene regulation. Dimethylated or trimethylated histone H3 lysine 27 (H3K27me2/3) marks silent or repressed genes involved in developmental processes and stress responses in plants. However, the role and the mechanism of the dynamic removal of H3K27me2/3 during gene activation remain unclear. Here, we show that the rice (Oryza sativa) Jumonji C (jmjC) protein gene JMJ705 encodes a histone lysine demethylase that specifically reverses H3K27me2/3. The expression of JMJ705 is induced by stress signals and during pathogen infection. Overexpression of the gene reduces the resting level of H3K27me2/3 resulting in preferential activation of H3K27me3-marked biotic stress-responsive genes and enhances rice resistance to the bacterial blight disease pathogen Xanthomonas oryzae pathovar oryzae. Mutation of the gene reduces plant resistance to the pathogen. Further analysis revealed that JMJ705 is involved in methyl jasmonate-induced dynamic removal of H3K27me3 and gene activation. The results suggest that JMJ705 is a biotic stress-responsive H3K27me2/3 demethylase that may remove H3K27me3 from marked defense-related genes and increase their basal and induced expression during pathogen infection.

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Year:  2013        PMID: 24280387      PMCID: PMC3875746          DOI: 10.1105/tpc.113.118802

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  54 in total

1.  Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4.

Authors:  Michiel Vermeulen; Klaas W Mulder; Sergei Denissov; W W M Pim Pijnappel; Frederik M A van Schaik; Radhika A Varier; Marijke P A Baltissen; Henk G Stunnenberg; Matthias Mann; H Th Marc Timmers
Journal:  Cell       Date:  2007-09-20       Impact factor: 41.582

2.  Histone demethylation by a family of JmjC domain-containing proteins.

Authors:  Yu-ichi Tsukada; Jia Fang; Hediye Erdjument-Bromage; Maria E Warren; Christoph H Borchers; Paul Tempst; Yi Zhang
Journal:  Nature       Date:  2005-12-18       Impact factor: 49.962

3.  JMJ14 is an H3K4 demethylase regulating flowering time in Arabidopsis.

Authors:  Falong Lu; Xia Cui; Shuaibin Zhang; Chunyan Liu; Xiaofeng Cao
Journal:  Cell Res       Date:  2010-02-23       Impact factor: 25.617

4.  Vernalization-mediated VIN3 Induction Overcomes the LIKE-HETEROCHROMATIN PROTEIN1/POLYCOMB REPRESSION COMPLEX2-mediated epigenetic repression.

Authors:  Dong-Hwan Kim; Brett R Zografos; Sibum Sung
Journal:  Plant Physiol       Date:  2010-07-29       Impact factor: 8.340

5.  CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome.

Authors:  Yongfeng Hu; Dengnian Liu; Xiaocao Zhong; Chengjun Zhang; Qifa Zhang; Dao-Xiu Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-26       Impact factor: 11.205

6.  Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases.

Authors:  Johnathan R Whetstine; Amanda Nottke; Fei Lan; Maite Huarte; Sarit Smolikov; Zhongzhou Chen; Eric Spooner; En Li; Gongyi Zhang; Monica Colaiacovo; Yang Shi
Journal:  Cell       Date:  2006-04-06       Impact factor: 41.582

7.  Rice jmjC domain-containing gene JMJ706 encodes H3K9 demethylase required for floral organ development.

Authors:  Qianwen Sun; Dao-Xiu Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-02       Impact factor: 11.205

8.  Reversible histone acetylation and deacetylation mediate genome-wide, promoter-dependent and locus-specific changes in gene expression during plant development.

Authors:  Lu Tian; M Paulus Fong; Jiyuan J Wang; Ning E Wei; Hongmei Jiang; R W Doerge; Z Jeffrey Chen
Journal:  Genetics       Date:  2004-09-15       Impact factor: 4.562

9.  Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense.

Authors:  Kang-Chang Kim; Zhibing Lai; Baofang Fan; Zhixiang Chen
Journal:  Plant Cell       Date:  2008-09-05       Impact factor: 11.277

10.  A companion cell-dominant and developmentally regulated H3K4 demethylase controls flowering time in Arabidopsis via the repression of FLC expression.

Authors:  Hongchun Yang; Zhifu Han; Ying Cao; Di Fan; Hong Li; Huixian Mo; Yi Feng; Lei Liu; Zheng Wang; Yanling Yue; Sujuan Cui; She Chen; Jijie Chai; Ligeng Ma
Journal:  PLoS Genet       Date:  2012-04-19       Impact factor: 5.917

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  44 in total

1.  Evolution and conservation of JmjC domain proteins in the green lineage.

Authors:  Yong Huang; Donghong Chen; Chunlin Liu; Wenhui Shen; Ying Ruan
Journal:  Mol Genet Genomics       Date:  2015-07-08       Impact factor: 3.291

2.  Anaplasma phagocytophilum increases the levels of histone modifying enzymes to inhibit cell apoptosis and facilitate pathogen infection in the tick vector Ixodes scapularis.

Authors:  Alejandro Cabezas-Cruz; Pilar Alberdi; Nieves Ayllón; James J Valdés; Raymond Pierce; Margarita Villar; José de la Fuente
Journal:  Epigenetics       Date:  2016-03-28       Impact factor: 4.528

3.  Cooperation between the H3K27me3 Chromatin Mark and Non-CG Methylation in Epigenetic Regulation.

Authors:  Shaoli Zhou; Xiaoyun Liu; Chao Zhou; Qiangwei Zhou; Yu Zhao; Guoliang Li; Dao-Xiu Zhou
Journal:  Plant Physiol       Date:  2016-08-17       Impact factor: 8.340

4.  The Chromatin Factor HNI9 and ELONGATED HYPOCOTYL5 Maintain ROS Homeostasis under High Nitrogen Provision.

Authors:  Fanny Bellegarde; Amel Maghiaoui; Jossia Boucherez; Gabriel Krouk; Laurence Lejay; Liên Bach; Alain Gojon; Antoine Martin
Journal:  Plant Physiol       Date:  2019-03-01       Impact factor: 8.340

Review 5.  The gymnastics of epigenomics in rice.

Authors:  Aditya Banerjee; Aryadeep Roychoudhury
Journal:  Plant Cell Rep       Date:  2017-09-02       Impact factor: 4.570

6.  Whole-genome landscape of H3K4me3, H3K36me3 and H3K9ac and their association with gene expression during Paulownia witches' broom disease infection and recovery processes.

Authors:  Lijun Yan; Xiaoqiao Zhai; Zhenli Zhao; Guoqiang Fan
Journal:  3 Biotech       Date:  2020-07-08       Impact factor: 2.406

7.  Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.

Authors:  Xiaoyun Liu; Shaoli Zhou; Wentao Wang; Yiran Ye; Yu Zhao; Qiutao Xu; Chao Zhou; Feng Tan; Saifeng Cheng; Dao-Xiu Zhou
Journal:  Plant Cell       Date:  2015-05-08       Impact factor: 11.277

8.  Assessment of the effect of ten heading time genes on reproductive transition and yield components in rice using a CRISPR/Cas9 system.

Authors:  Yue Cui; Mengmeng Zhu; Zhengjin Xu; Quan Xu
Journal:  Theor Appl Genet       Date:  2019-03-19       Impact factor: 5.699

Review 9.  What if the cold days return? Epigenetic mechanisms in plants to cold tolerance.

Authors:  Rasme Hereme; Carolina Galleguillos; Samuel Morales-Navarro; Marco A Molina-Montenegro
Journal:  Planta       Date:  2021-08-09       Impact factor: 4.116

10.  Genome-wide identification and functional analysis of JmjC domain-containing genes in flower development of Rosa chinensis.

Authors:  Yuwei Dong; Jun Lu; Jinyi Liu; Abdul Jalal; Changquan Wang
Journal:  Plant Mol Biol       Date:  2020-01-02       Impact factor: 4.076

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