Literature DB >> 20665267

Two-dimensional crystallization of integral membrane proteins for electron crystallography.

David L Stokes1, William J Rice, Minghui Hu, Changki Kim, Iban Ubarretxena-Belandia.   

Abstract

Although membrane proteins make up 30% of the proteome and are a common target for therapeutic drugs, determination of their atomic structure remains a technical challenge. Electron crystallography represents an alternative to the conventional methods of X-ray diffraction and NMR and relies on the formation of two-dimensional crystals. These crystals are produced by reconstituting purified, detergent-solubilized membrane proteins back into the native environment of a lipid bilayer. This chapter reviews methods for producing two-dimensional crystals and for screening them by negative stain electron microscopy. In addition, we show examples of the different morphologies that are commonly obtained and describe basic image analysis procedures that can be used to evaluate their promise for structure determination by cryoelectron microscopy.

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Year:  2010        PMID: 20665267      PMCID: PMC3128833          DOI: 10.1007/978-1-60761-762-4_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

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Journal:  Curr Opin Struct Biol       Date:  2001-10       Impact factor: 6.809

Review 2.  Two-dimensional crystals: a powerful approach to assess structure, function and dynamics of membrane proteins.

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Journal:  FEBS Lett       Date:  2001-08-31       Impact factor: 4.124

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Journal:  Nature       Date:  1975-09-04       Impact factor: 49.962

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Authors:  Sriram Subramaniam; Teruhisa Hirai; Richard Henderson
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2002-05-15       Impact factor: 4.226

5.  Towards automated screening of two-dimensional crystals.

Authors:  Anchi Cheng; Albert Leung; Denis Fellmann; Joel Quispe; Christian Suloway; James Pulokas; Priyanka D Abeyrathne; Joseph S Lam; Bridget Carragher; Clinton S Potter
Journal:  J Struct Biol       Date:  2007-09-25       Impact factor: 2.867

6.  Three-dimensional structure of membrane proteins determined by two-dimensional crystallization, electron cryomicroscopy, and image analysis.

Authors:  M Yeager; V M Unger; A K Mitra
Journal:  Methods Enzymol       Date:  1999       Impact factor: 1.600

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Authors:  A Fukami; K Adachi
Journal:  J Electron Microsc (Tokyo)       Date:  1965

8.  How to make tubular crystals by reconstitution of detergent-solubilized Ca2(+)-ATPase.

Authors:  H S Young; J L Rigaud; J J Lacapère; L G Reddy; D L Stokes
Journal:  Biophys J       Date:  1997-06       Impact factor: 4.033

9.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

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Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

10.  2D crystallization: from art to science.

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Journal:  Ultramicroscopy       Date:  1992-10       Impact factor: 2.689

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  3 in total

1.  Sparse and incomplete factorial matrices to screen membrane protein 2D crystallization.

Authors:  R Lasala; N Coudray; A Abdine; Z Zhang; M Lopez-Redondo; R Kirshenbaum; J Alexopoulos; Z Zolnai; D L Stokes; I Ubarretxena-Belandia
Journal:  J Struct Biol       Date:  2014-12-03       Impact factor: 2.867

2.  High-throughput methods for electron crystallography.

Authors:  David L Stokes; Iban Ubarretxena-Belandia; Tamir Gonen; Andreas Engel
Journal:  Methods Mol Biol       Date:  2013

3.  Studying membrane proteins with MicroED.

Authors:  Marc J Gallenito; Tamir Gonen
Journal:  Biochem Soc Trans       Date:  2022-02-28       Impact factor: 4.919

  3 in total

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