Literature DB >> 11785754

Electron cryomicroscopy methods.

V M Unger1.   

Abstract

Electron cryomicroscopy methods comprise a rapidly expanding field providing insights into the structure and function of biological macromolecules and their supramolecular assemblies. The 3.8 A resolution structure of the membrane protein aquaporin, a view of the herpesvirus capsid at 8.5 A and the 10 A resolution structure of the spliceosomal U1 small nuclear ribonucleoprotein complex are three outstanding examples emphasizing the versatility of this technique.

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Year:  2001        PMID: 11785754     DOI: 10.1016/s0959-440x(00)00260-8

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  12 in total

1.  An automatic method for predicting transmembrane protein structures using cryo-EM and evolutionary data.

Authors:  Sarel J Fleishman; Susan Harrington; Richard A Friesner; Barry Honig; Nir Ben-Tal
Journal:  Biophys J       Date:  2004-08-31       Impact factor: 4.033

2.  Coarse-grained molecular dynamics of tetrameric transmembrane peptide bundles within a lipid bilayer.

Authors:  Thuy Hien T Nguyen; Niny Z Rao; William M Schroeder; Preston B Moore
Journal:  Chem Phys Lipids       Date:  2010-04-28       Impact factor: 3.329

3.  Constructing atomic structural models into cryo-EM densities using molecular dynamics - Pros and cons.

Authors:  Yuhang Wang; Mrinal Shekhar; Darren Thifault; Christopher J Williams; Ryan McGreevy; Jane Richardson; Abhishek Singharoy; Emad Tajkhorshid
Journal:  J Struct Biol       Date:  2018-08-07       Impact factor: 2.867

Review 4.  Present and future of membrane protein structure determination by electron crystallography.

Authors:  Iban Ubarretxena-Belandia; David L Stokes
Journal:  Adv Protein Chem Struct Biol       Date:  2010       Impact factor: 3.507

5.  CHARMM-GUI MDFF/xMDFF Utilizer for Molecular Dynamics Flexible Fitting Simulations in Various Environments.

Authors:  Yifei Qi; Jumin Lee; Abhishek Singharoy; Ryan McGreevy; Klaus Schulten; Wonpil Im
Journal:  J Phys Chem B       Date:  2016-12-23       Impact factor: 2.991

6.  Molecular dynamics-based refinement and validation for sub-5 Å cryo-electron microscopy maps.

Authors:  Abhishek Singharoy; Ivan Teo; Ryan McGreevy; John E Stone; Jianhua Zhao; Klaus Schulten
Journal:  Elife       Date:  2016-07-07       Impact factor: 8.140

7.  Two-dimensional crystallization of integral membrane proteins for electron crystallography.

Authors:  David L Stokes; William J Rice; Minghui Hu; Changki Kim; Iban Ubarretxena-Belandia
Journal:  Methods Mol Biol       Date:  2010

8.  Molecular dynamics simulations of homo-oligomeric bundles embedded within a lipid bilayer.

Authors:  Thuy Hien T Nguyen; Zhiwei Liu; Preston B Moore
Journal:  Biophys J       Date:  2013-10-01       Impact factor: 4.033

9.  Distance-restrained docking of rifampicin and rifamycin SV to RNA polymerase using systematic FRET measurements: developing benchmarks of model quality and reliability.

Authors:  Jennifer L Knight; Vladimir Mekler; Jayanta Mukhopadhyay; Richard H Ebright; Ronald M Levy
Journal:  Biophys J       Date:  2004-11-12       Impact factor: 4.033

10.  Single particle electron microscopy.

Authors:  Egbert J Boekema; Mihaela Folea; Roman Kouřil
Journal:  Photosynth Res       Date:  2009 Nov-Dec       Impact factor: 3.573

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