Literature DB >> 20658948

Development and description of GETT: a genetic testing evidence tracking tool.

François Rousseau1, Carmen Lindsay, Marc Charland, Yves Labelle, Jean Bergeron, Ingeborg Blancquaert, Robert Delage, Brian Gilfix, Michel Miron, Grant A Mitchell, Luc Oligny, Mario Pazzagli, Cyril Mamotte, Deborah Payne.   

Abstract

BACKGROUND: The completion of the Human Genome Project has increased the pace of discovery of genetic markers for disease. Despite tremendous efforts in fundamental research, clinical applications still lag behind expectations, partly due to the lack of effective tools to systematically search for and summarize published data relative to the clinical assessment of new diagnostic molecular tests.
METHODS: Through a collaborative process using published tools and an expert panel, we developed a detailed checklist of the evidence that needs to be collected or produced to evaluate the potential usefulness of a new molecular diagnostic test. This tool is called GETT, for Genetic testing Evidence Tracking Tool.
RESULTS: GETT allows 1) researchers to summarize the current evidence and to identify knowledge gaps for further research and; 2) stakeholders to collect data related to a given molecular test and improve their decision-making process. GETT comprises 72 clearly defined items/questions, grouped into 10 categories and 26 sub-themes, including an overview of disease epidemiology and genetics, the available diagnostic tools, and their analytical and clinical performances, availability of quality control programs, laboratory and clinical best practice guidelines, clinical utility, and impact on health care and psycho-social, ethical and legal implications. It also includes a summary of the evidence available and attempts to prioritise knowledge gaps related to the testing. We also compare GETT to other existing frameworks.
CONCLUSIONS: This systematic evidence-based tracking tool, which is more detailed than existing frameworks and provides clear definition for each item, will help streamline collection of the available evidence to appraise the potential for clinical application of new molecular diagnostic tests and prioritize research to produce the evidence-base relative to the clinical implementation of molecular diagnostic tests.

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Year:  2010        PMID: 20658948     DOI: 10.1515/CCLM.2010.291

Source DB:  PubMed          Journal:  Clin Chem Lab Med        ISSN: 1434-6621            Impact factor:   3.694


  7 in total

Review 1.  Evidence-based medicine and big genomic data.

Authors:  John P A Ioannidis; Muin J Khoury
Journal:  Hum Mol Genet       Date:  2018-05-01       Impact factor: 6.150

2.  How is genetic testing evaluated? A systematic review of the literature.

Authors:  Erica Pitini; Corrado De Vito; Carolina Marzuillo; Elvira D'Andrea; Annalisa Rosso; Antonio Federici; Emilio Di Maria; Paolo Villari
Journal:  Eur J Hum Genet       Date:  2018-02-08       Impact factor: 4.246

3.  Evaluating diagnostic strategies for early detection of cancer: the CanTest framework.

Authors:  Fiona M Walter; Matthew J Thompson; Ian Wellwood; Gary A Abel; William Hamilton; Margaret Johnson; Georgios Lyratzopoulos; Michael P Messenger; Richard D Neal; Greg Rubin; Hardeep Singh; Anne Spencer; Stephen Sutton; Peter Vedsted; Jon D Emery
Journal:  BMC Cancer       Date:  2019-06-14       Impact factor: 4.430

4.  Prospective head-to-head comparison of accuracy of two sequencing platforms for screening for fetal aneuploidy by cell-free DNA: the PEGASUS study.

Authors:  François Rousseau; Sylvie Langlois; Jo-Ann Johnson; Jean Gekas; Emmanuel Bujold; François Audibert; Mark Walker; Sylvie Giroux; André Caron; Valérie Clément; Jonatan Blais; Tina MacLeod; Richard Moore; Julie Gauthier; Loubna Jouan; Alexandre Laporte; Ousmane Diallo; Jeremy Parker; Lucas Swanson; Yongjun Zhao; Yves Labelle; Yves Giguère; Jean-Claude Forest; Julian Little; Aly Karsan; Guy Rouleau
Journal:  Eur J Hum Genet       Date:  2019-06-23       Impact factor: 4.246

5.  A Systematic Review and Recommendations Around Frameworks for Evaluating Scientific Validity in Nutritional Genomics.

Authors:  Justine Keathley; Véronique Garneau; Daniela Zavala-Mora; Robyn R Heister; Ellie Gauthier; Josiane Morin-Bernier; Robert Green; Marie-Claude Vohl
Journal:  Front Nutr       Date:  2021-12-14

6.  Evaluating genomic tests from bench to bedside: a practical framework.

Authors:  Jennifer S Lin; Matthew Thompson; Katrina A B Goddard; Margaret A Piper; Carl Heneghan; Evelyn P Whitlock
Journal:  BMC Med Inform Decis Mak       Date:  2012-10-19       Impact factor: 2.796

7.  A Systematic Review of the Value Assessment Frameworks Used within Health Technology Assessment of Omics Technologies and Their Actual Adoption from HTA Agencies.

Authors:  Ilda Hoxhaj; Laurenz Govaerts; Steven Simoens; Walter Van Dyck; Isabelle Huys; Iñaki Gutiérrez-Ibarluzea; Stefania Boccia
Journal:  Int J Environ Res Public Health       Date:  2020-10-30       Impact factor: 3.390

  7 in total

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