Literature DB >> 20657179

Ribosome-associated GTPases: the role of RNA for GTPase activation.

Nina Clementi1, Norbert Polacek.   

Abstract

The GTPase super-family comprises a variety of G proteins found in all three domains of life. Although they are participating in completely different processes like signal transduction, protein biosynthesis and regulation of cell proliferation, they all share a highly conserved G domain and use a common mechanism for GTP hydrolysis. Exact timing in hydrolyzing the bound GTP serves as a molecular switch to initiate diverse cellular reactions. Classical GTPases depend on external proteins to fire GTP hydrolysis (GAPs), and following the GTPase reaction to exchange GDP for GTP (GEFs), converting the GTPase into the active state again. In recent years it became clear that there are many GTPases that do not follow this classical switch mode scheme. Certain ribosome-associated GTPases are not reliant on other GEF proteins to exchange GDP for GTP. Furthermore many of these G proteins are not activated by external GAPs, but by evolutionarily ancient molecules, namely by RNA.

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Year:  2010        PMID: 20657179     DOI: 10.4161/rna.7.5.12467

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  20 in total

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2.  Toxicity of ricin A chain is reduced in mammalian cells by inhibiting its interaction with the ribosome.

Authors:  Amanda E Jetzt; Xiao-Ping Li; Nilgun E Tumer; Wendie S Cohick
Journal:  Toxicol Appl Pharmacol       Date:  2016-09-15       Impact factor: 4.219

3.  Generation of chemically engineered ribosomes for atomic mutagenesis studies on protein biosynthesis.

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Journal:  Nat Protoc       Date:  2011-04-07       Impact factor: 13.491

Review 4.  Mitochondrial ribosome assembly in health and disease.

Authors:  Dasmanthie De Silva; Ya-Ting Tu; Alexey Amunts; Flavia Fontanesi; Antoni Barrientos
Journal:  Cell Cycle       Date:  2015-06-01       Impact factor: 4.534

5.  Somatic mutations throughout the entire mitochondrial genome are associated with elevated PSA levels in prostate cancer patients.

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Journal:  Am J Hum Genet       Date:  2010-12-10       Impact factor: 11.025

Review 6.  Prokaryotic diacylglycerol kinase and undecaprenol kinase.

Authors:  Wade D Van Horn; Charles R Sanders
Journal:  Annu Rev Biophys       Date:  2011-12-20       Impact factor: 12.981

Review 7.  Targeting ricin to the ribosome.

Authors:  Kerrie L May; Qing Yan; Nilgun E Tumer
Journal:  Toxicon       Date:  2013-02-20       Impact factor: 3.033

8.  The noncoding RNAs SNORD50A and SNORD50B bind K-Ras and are recurrently deleted in human cancer.

Authors:  Zurab Siprashvili; Dan E Webster; Danielle Johnston; Rajani M Shenoy; Alexander J Ungewickell; Aparna Bhaduri; Ross Flockhart; Brian J Zarnegar; Yonglu Che; Francesca Meschi; Joseph D Puglisi; Paul A Khavari
Journal:  Nat Genet       Date:  2015-11-23       Impact factor: 38.330

9.  Elongation factor 4 remodels the A-site tRNA on the ribosome.

Authors:  Matthieu G Gagnon; Jinzhong Lin; Thomas A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-18       Impact factor: 11.205

10.  Control of ribosomal subunit rotation by elongation factor G.

Authors:  Arto Pulk; Jamie H D Cate
Journal:  Science       Date:  2013-06-28       Impact factor: 47.728

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