Literature DB >> 2065665

xUBF and Rib 1 are both required for formation of a stable polymerase I promoter complex in X. laevis.

B McStay1, C H Hu, C S Pikaard, R H Reeder.   

Abstract

We show that three protein fractions are required for accurate transcription initiation at a Xenopus laevis ribosomal gene promoter in vitro: RNA polymerase I, Rib1 and xUBF. The Rib1 and xUBF fractions are both necessary and sufficient for formation of a stable initiation complex. The xUBF fraction can be completely replaced by recombinant xUBF. We also report the sequence of a cDNA clone for xUBF. xUBF is 701 amino acids in length, contains domain which are related to a domain found in chromosomal proteins HMG 1 and 2, and has an acidic carboxy terminus of 87 amino acids. xUBF is closely similar in amino acid sequence to its previously reported human homolog, hUBF, except that xUBF has only three of the HMG-related domains while hUBF has four and therefore is 63 amino acids longer than xUBF.

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Year:  1991        PMID: 2065665      PMCID: PMC452920          DOI: 10.1002/j.1460-2075.1991.tb07766.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  28 in total

1.  Identification of two forms of the RNA polymerase I transcription factor UBF.

Authors:  D J O'Mahony; L I Rothblum
Journal:  Proc Natl Acad Sci U S A       Date:  1991-04-15       Impact factor: 11.205

2.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

3.  Purification and characterization of a transcription factor that confers promoter specificity to human RNA polymerase I.

Authors:  R M Learned; S Cordes; R Tjian
Journal:  Mol Cell Biol       Date:  1985-06       Impact factor: 4.272

4.  A simple and very efficient method for generating cDNA libraries.

Authors:  U Gubler; B J Hoffman
Journal:  Gene       Date:  1983-11       Impact factor: 3.688

5.  Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing.

Authors:  S Henikoff
Journal:  Gene       Date:  1984-06       Impact factor: 3.688

6.  Ribosomal RNA transcription in vitro is species specific.

Authors:  I Grummt; E Roth; M R Paule
Journal:  Nature       Date:  1982-03-11       Impact factor: 49.962

7.  Encephalomyocarditis virus 3C protease: efficient cell-free expression from clones which link viral 5' noncoding sequences to the P3 region.

Authors:  G D Parks; G M Duke; A C Palmenberg
Journal:  J Virol       Date:  1986-11       Impact factor: 5.103

8.  Fractionation and reconstitution of factors required for accurate transcription of mammalian ribosomal RNA genes: identification of a species-dependent initiation factor.

Authors:  Y Mishima; I Financsek; R Kominami; M Muramatsu
Journal:  Nucleic Acids Res       Date:  1982-11-11       Impact factor: 16.971

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  A purified transcription factor (TIF-IB) binds to essential sequences of the mouse rDNA promoter.

Authors:  J Clos; D Buttgereit; I Grummt
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

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  55 in total

Review 1.  Survey and summary: transcription by RNA polymerases I and III.

Authors:  M R Paule; R J White
Journal:  Nucleic Acids Res       Date:  2000-03-15       Impact factor: 16.971

2.  Characterization of nucleotide sequences that interact with a nuclear protein fraction in rRNA gene of Vicia faba.

Authors:  T Nakajima; A Suzůki; S Tanifuji; A Kato
Journal:  Plant Mol Biol       Date:  1992-12       Impact factor: 4.076

3.  Dual role of the nucleolar transcription factor UBF: trans-activator and antirepressor.

Authors:  A Kuhn; I Grummt
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

4.  Transcription and tyranny in the nucleolus: the organization, activation, dominance and repression of ribosomal RNA genes.

Authors:  Craig S Pikaard
Journal:  Arabidopsis Book       Date:  2002-08-12

5.  Purification of components required for accurate transcription of ribosomal RNA from Acanthamoeba castellanii.

Authors:  C T Iida; M R Paule
Journal:  Nucleic Acids Res       Date:  1992-06-25       Impact factor: 16.971

6.  Complex formation of nuclear proteins with the RNA polymerase I promoter and repeated elements in the external transcribed spacer of Cucumis sativus ribosomal DNA.

Authors:  U Zentgraf; V Hemleben
Journal:  Nucleic Acids Res       Date:  1992-07-25       Impact factor: 16.971

7.  Ribosomal gene promoter domains can function as artificial enhancers of RNA polymerase I transcription, supporting a promoter origin for natural enhancers in Xenopus.

Authors:  C S Pikaard
Journal:  Proc Natl Acad Sci U S A       Date:  1994-01-18       Impact factor: 11.205

8.  The role of acetylation in rDNA transcription.

Authors:  I Hirschler-Laszkiewicz; A Cavanaugh; Q Hu; J Catania; M L Avantaggiati; L I Rothblum
Journal:  Nucleic Acids Res       Date:  2001-10-15       Impact factor: 16.971

9.  DNA-dependent protein kinase specifically represses promoter-directed transcription initiation by RNA polymerase I.

Authors:  P Labhart
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-28       Impact factor: 11.205

10.  Upstream binding factor stabilizes Rib 1, the TATA-binding-protein-containing Xenopus laevis RNA polymerase I transcription factor, by multiple protein interactions in a DNA-independent manner.

Authors:  M Bodeker; C Cairns; B McStay
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

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