| Literature DB >> 20646311 |
Michelle L Kirian1, June M Weintraub.
Abstract
BACKGROUND: Water utilities continue to be interested in implementing syndromic surveillance for the enhanced detection of waterborne disease outbreaks. The authors evaluated the ability of sales of over-the-counter diarrheal remedies available from the National Retail Data Monitor to predict endemic and epidemic gastrointestinal disease in the San Francisco Bay Area.Entities:
Mesh:
Substances:
Year: 2010 PMID: 20646311 PMCID: PMC2920250 DOI: 10.1186/1472-6947-10-39
Source DB: PubMed Journal: BMC Med Inform Decis Mak ISSN: 1472-6947 Impact factor: 2.796
Figure 1Plots of Outbreak-Associated Gastrointestinal Cases, Individual Gastrointestinal Cases, Diarrheal Remedy Sales, and Differenced Diarrheal Remedy Sales. Standardized weekly counts of gastrointestinal outbreak-associated cases, diarrheal illness case reports, Diarrheal Remedy Sales and differenced Diarrheal Remedy Sales in three San Francisco Bay Area Counties from January 2004 to July 2005. All data aggregated to the first Sunday of week. Diarrheal Remedy Sales are aggregated by week of sale, cases by week of report to the health department and outbreak cases by week of onset of the first associated case. Vertical axes are measured in standard deviations.
Gastrointestinal Outbreak and Case Characteristics in the San Francisco Bay Area, July 2003 through December 2007
| N | Outbreak-Associated Cases* | N | ||||
|---|---|---|---|---|---|---|
| Maximum | Median | Mean | ||||
| All Disease Outbreaks | 233 | 153 | 19 | 25 | Case Etiology | |
| Outbreaks of Reportable Diseases | 31 | 65 | 12 | 16 | campylobacteriosis | 3316 |
| Outbreaks of Not-Reportable Diseases | 202 | 153 | 21 | 27 | cryptosporidiosis | 2210 |
| Study Period | salmonellosis | 2187 | ||||
| Model (6/29/03 to 7/2/05)† | 71 | 110 | 15 | 23 | giardiasis | 1739 |
| Validation (7/3/05 to 12/31/05) | 11 | 26 | 14 | 13 | shigellosis | 1002 |
| Forecasting (1/1/06 to 12/30/07) | 154 | 153 | 21 | 27 | amoebiasis | 512 |
| Outbreak Etiology | hepatitis A | 152 | ||||
| norovirus | 144 | 153 | 24 | 30 | Escherichia | 151 |
| unknown | 41 | 80 | 18 | 21 | vibriosis | 118 |
| salmonellosis | 17 | 65 | 13 | 22 | typhoid | 62 |
| Bacillus | 8 | 38 | 8 | 12 | listeriosis | 39 |
| Escherichia | 4 | 18 | 11 | 11 | yersiniosis | 26 |
| scombroid poisoning | 3 | 7 | 5 | 5 | legionellosis | 17 |
| bacterial toxin poisoning | 3 | 22 | 4 | 10 | ciguatera poisoning | 5 |
| chemical toxin poisoning | 2 | 4 | 3 | 3 | ||
| vibriosis | 2 | 27 | 21 | 21 | ||
| ciguatera poisoning | 2 | 3 | 3 | 3 | ||
| hepatitis A | 1 | 2 | 2 | 2 | ||
| trichinosis | 1 | 2 | 2 | 2 | ||
| cryptosporidiosis | 1 | 16 | 16 | 16 | ||
| yersiniosis | 1 | 1 | 1 | 1 | ||
| giardiasis | 1 | 14 | 14 | 14 | ||
| rotavirus | 1 | 6 | 6 | 6 | ||
| campylobacter | 1 | 3 | 3 | 3 | ||
*Number of cases not available for five outbreaks (3 salmonellosis, 2 norovirus) between January 1, 2006 and January 1, 2008.
† Modeling period was shorter --Jan 4, 2004 to Jul 2, 2005-- for Univariate Case Modeling and Cross Correlation Analysis.
σ Outbreak and case data sets are not mutually exclusive or encompassing.
Gastrointestinal Outbreaks with 50 or More Cases in the San Francisco Bay Area, January 2006 through December 2007
| Etiology | Cases | First Onset | Last Onset | Institutional | Over-the-Counter Drug ARIMA (0,1,1) Signal |
|---|---|---|---|---|---|
| Norovirus | 101 | 1/25/06 | Yes | Yes | |
| Unknown/Norovirus | 60 | 4/18/06 | No | Yes | |
| Unknown/Norovirus | 62 | 4/24/06 | Yes | Yes | |
| Norovirus | 107 | 4/25/06 | 5/2/2006 | No | No |
| Unknown/Norovirus | 55 | 4/26/06 | No/Unknown | Yes | |
| Norovirus | 50 | 5/8/06 | Yes | Yes | |
| Norovirus | 81 | 10/26/06 | Yes | No | |
| Norovirus | 86 | 11/23/06 | Yes | No | |
| Norovirus | 72 | 11/30/06 | Yes | No | |
| Norovirus | 63 | 11/30/06 | Yes | No | |
| Unknown | 80 | 12/7/06 | Yes | No | |
| Unknown | 61 | 12/7/06 | No/Unknown | No | |
| Norovirus | 76 | 1/3/07 | Yes | No | |
| Norovirus | 60 | 1/8/07 | Yes | No | |
| Norovirus | 92 | 7/13/07 | 7/17/07 | No | No |
| Norovirus | 153 | 8/3/07 | 8/17/07 | No/Unknown | No |
| Norovirus | 51 | 9/15/07 | 9/19/07 | No/Unknown | No |
| Norovirus | 52 | 12/20/07 | 1/1/08 | Yes | No |
| Norovirus | 52 | 12/22/07 | Yes | No | |
| Norovirus | 76 | 12/22/07 | 1/15/08 | No/Unknown | No |
Abbreviations: ARIMA(0,1,1) First Order Integrated Moving Average
Figure 2Cross Correlations Between Diarrheal Remedy Sales and Diarrheal Illnesses. Diarrheal Remedy Sales and diarrheal illness case reports cross correlations at time lags from zero to 19 weeks. No significant correlations, bars exceeding the 95% confidence interval (shaded), were found.
Sensitivity and Specificity of Diarrheal Remedy Sales Model-Generated and Randomly Selected Signals
| All Outbreaks | Outbreaks with ≥ 50 Cases | Outbreaks with ≥ 100 Cases | ||||
|---|---|---|---|---|---|---|
| Sensitivity | Specificity | Sensitivity | Specificity | Sensitivity | Specificity | |
| Over-the-counter drug IMA(1) Signal | 4% (4/94) | 100% (11/11) | 4% (1/26) | 97% (76/79) | 14% (1/7) | 97% (95/98) |
| Random Signals 1 | 4% (4/94) | 100% (11/11) | 8% (2/26) | 97% (77/79) | 14% (1/7) | 97% (95/98) |
| Random Signals 2 | 3% (3/94) | 91% (10/11) | 4% (1/26) | 97% (76/79) | 0% (0/7) | 96% (94/98) |
| Random Signals 3 | 3% (3/94) | 100%(11/11) | 4% (1/26) | 97% (77/79) | 0% (0/7) | 97% (95/98) |
* First day of week for each model generated and randomly generated signal.