| Literature DB >> 23672877 |
T Andersson1, P Bjelkmar1, A Hulth1, J Lindh1, S Stenmark2, M Widerström3.
Abstract
For the purpose of developing a national system for outbreak surveillance, local outbreak signals were compared in three sources of syndromic data--telephone triage of acute gastroenteritis, web queries about symptoms of gastrointestinal illness, and over-the-counter (OTC) pharmacy sales of antidiarrhoeal medication. The data sources were compared against nine known waterborne and foodborne outbreaks in Sweden in 2007-2011. Outbreak signals were identified for the four largest outbreaks in the telephone triage data and the two largest outbreaks in the data on OTC sales of antidiarrhoeal medication. No signals could be identified in the data on web queries. The signal magnitude for the fourth largest outbreak indicated a tenfold larger outbreak than officially reported, supporting the use of telephone triage data for situational awareness. For the two largest outbreaks, telephone triage data on adult diarrhoea provided outbreak signals at an early stage, weeks and months in advance, respectively, potentially serving the purpose of early event detection. In conclusion, telephone triage data provided the most promising source for surveillance of point-source outbreaks.Entities:
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Year: 2013 PMID: 23672877 PMCID: PMC3891475 DOI: 10.1017/S0950268813001088
Source DB: PubMed Journal: Epidemiol Infect ISSN: 0950-2688 Impact factor: 2.451
List of larger waterborne and foodborne outbreaks in Sweden 2007–2011
| Midpoint | Municipality | Population | County | County population | Agent | Vehicle | Point-source | Reported cases | Signal validation |
|---|---|---|---|---|---|---|---|---|---|
| 27 Nov. 2010 | Östersund | 59 416 | Jämtland | 126 691 | Drinking water | Surface source | 27 000 | 1/1/0 | |
| 19 Apr. 2011 | Skellefteå | 71 580 | Västerbotten | 259 667 | Drinking water | Surface source | 20 000 | 1/1/0 | |
| 11 Sept. 2008 | Lilla Edet | 12 831 | Västra Götaland | 1 558 130 | Calicivirus | Drinking water | Surface source | 2400 | 1/0/0 |
| 7 Mar. 2008 | Helsingborg | 126 754 | Skåne | 1 214 758 | Calicivirus | Bakery products | Bakery | 369 | 1/0/0 |
| 12 July 2009 | Karlskrona | 63 342 | Blekinge | 152 591 | Norovirus | Unknown | Elderly care | 185 | 0/0/0 |
| 21 Oct. 2009 | Uddevalla | 51 518 | Västra Götaland | 1 569 458 | Calicivirus | Unknown | Primary school | 145 | 0/0/0 |
| 27 Aug. 2009 | Alingsås | 37 515 | Västra Götaland | 1 569 458 | Calicivirus | Frozen raspberries | High school | 130 | 0/0/0 |
| 30 May 2007 | Skövde | 50 610 | Västra Götaland | 1 558 130 | Norovirus | Mixed foods | Restaurant | 100 | 0/0/0 |
| 17 Dec. 2008 | Skövde | 50 610 | Västra Götaland | 1 558 130 | Norovirus | Mixed foods | Restaurant | 100 | 0/0/0 |
Signal validation for the four largest outbreaks in Östersund, Skellefteå, Lilla Edet and Helsingborg
| Source | Statistics | Municipality | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Östersund | Skellefteå | Lilla Edet | Helsingborg | |||||||
| 1177 calls | Visual confirmation | Yes | Yes | Yes | Yes | |||||
| Time window | 2 weeks | 4 weeks | 2 weeks | 4 weeks | 2 weeks | 4 weeks | 2 weeks | 4 weeks | ||
| Signal count | Target | 995 | 1316 | 669 | 1096 | 78 | 99 | 362 | 566 | |
| Baseline | 321 | 429 | 427 | 486 | 21 | 35 | 204 | 405 | ||
| Signal-to-noise ratio | 4·16 | 5·6 | 1·41 | 3·22 | 2·64 | 2·15 | 2·82 | 0·93 | ||
| Test | 591·6 | 420·4 | 75·0 | 214·4 | 57·1 | 28·4 | 66·8 | 21·4 | ||
| Over-the-counter | Visual confirmation | Yes | Yes | No | No | |||||
| sales | Time window | 2 weeks | 4 weeks | 2 weeks | 4 weeks | 2 weeks | 4 weeks | 2 weeks | 4 weeks | |
| Count | Target | 1043 | 1487 | 751 | 1290 | 62 | 115 | 823 | 1537 | |
| Baseline | 444 | 724 | 539 | 888 | 53 | 83 | 714 | 1401 | ||
| Signal-to-noise ratio | 2·37 | 2·05 | 0·95 | 1·07 | 0·12 | 0·35 | 0·2 | 0·16 | ||
| Test | 202·0 | 237·3 | 21·8 | 60·8 | 0·2 | 4·1 | 2·0 | 2·4 | ||
| 0·639 | 0·043 | 0·153 | 0·119 | |||||||
| Web queries | Visual confirmation | Yes | No | No | No | |||||
| Time window | 2 weeks | 4 weeks | 2 weeks | 4 weeks | 2 weeks | 4 weeks | 2 weeks | 4 weeks | ||
| Count | Target | 2160 | 4867 | 1279 | 2525 | 816 | 1548 | 2106 | 3998 | |
| Baseline | 2707 | 3945 | 1246 | 2687 | 732 | 1392 | 1892 | 3955 | ||
| Signal-to-noise ratio | −0·97 | 0·45 | −0·12 | −0·19 | 0·16 | 0·28 | 0·13 | −0·08 | ||
| Test | 105·1 | 66·8 | 1·2 | 12·3 | 0·6 | 3·7 | 1·4 | 1·2 | ||
| 0·281 | 0·435 | 0·054 | 0·229 | 0·279 | ||||||
Fig. 1.Number of 1177 calls relating to adult gastrointestinal symptoms during the outbreaks in (a) Östersund and (b) Skellefteå. The smoothed curve is based on a locally weighted polynomial regression performed with the R function ‘lowess', using a smoother span of 14 days. The solid triangles indicate the call count at the outbreak midpoint, i.e. the day when regional and local authorities issued official public information. The vertex indicates the signal count at the midpoint.
Fig. 2.(a) Pharmacy over-the-counter sales of antidiarrhoeals and (b) daily sums of web queries on gastrointestinal symptoms during the outbreak in Östersund. The smoothed curve is based on a locally weighted polynomial regression performed with the R function ‘lowess’, using a smoother span of 14 days. The solid triangles indicate the unit and search counts at the outbreak midpoint, i.e. the day when regional and local authorities issued official public information on the outbreak. The vertex indicates the signal count at the midpoint.
Fig. 3.Signal rates. Regression analysis of count data during the observed outbreak period of Östersund on municipality population size for (a) adult diarrhoea calls and (b) over-the-counter (OTC) sales. The analyses included municipalities from half, to twice the size of the targeted municipality (Östersund), excluding municipalities affected by outbreaks. The OTC plot extends beyond the range of the analysis.
Fig. 4.Signal detection analysis. The stepped graphs represent daily counts of adult gastrointestinal (GI) calls during the outbreak periods in (a) Östersund and (b) Skellefteå, before the outbreak midpoints (27 November 2010 and 19 April 2011, respectively). The solid and open circles indicate strong and weak outbreak signals when the detection algorithm was applied to three streams of 1177 triage data: adult GI calls (upper circles), diarrhoea (middle circles), and stomach pain (lower circles).
Signal detection analysis for the outbreaks in Östersund and Skellefteå
| Municipality | Threshold | Signal | Diarrhoea | Vomiting | Stomach pain | Adult GI | All GI |
|---|---|---|---|---|---|---|---|
| Östersund | Low | FAR | 0% | 0% | 0% | 0% | 0% |
| HR | 57·7% | 3·8% | 53·8% | 65·3% | 46·2% | ||
| High | FAR | 0% | 0% | 0% | 0% | 0% | |
| HR | 30·8% | 0% | 26·9% | 46·2% | 46·2% | ||
| Skellefteå | Low | FAR | 0·8% | 0·1% | 0% | 0·2% | 1·5% |
| (long outbreak period) | HR | 40·0% | 18·4% | 16·0% | 41·6% | 30·4% | |
| High | FAR | 0% | 0% | 0% | 0% | 0·1% | |
| HR | 13·6% | 4·8% | 4·8% | 13·6% | 9·6% | ||
| Skellefteå (short outbreak period) | Low | FAR | 0% | 0% | 0·1% | 0·1% | 0·7% |
| HR | 53·1% | 2·4% | 16·3% | 49·0% | 26·5% | ||
| High | FAR | 0% | 0% | 0% | 0% | 0% | |
| HR | 28·6% | 0·8% | 8·2% | 18·4% | 12·2% |
Low/High: +3/+5 standard deviations.
FAR/HR: False alarm rate/Hit rate.
GI, Gastrointestinal illness (diarrhoea, vomiting, stomach pain).
Including children (<18 years).