Literature DB >> 28511741

Influenza detection and prediction algorithms: comparative accuracy trial in Östergötland county, Sweden, 2008-2012.

A Spreco1, O Eriksson2, Ö Dahlström3, T Timpka1,4.   

Abstract

Methods for the detection of influenza epidemics and prediction of their progress have seldom been comparatively evaluated using prospective designs. This study aimed to perform a prospective comparative trial of algorithms for the detection and prediction of increased local influenza activity. Data on clinical influenza diagnoses recorded by physicians and syndromic data from a telenursing service were used. Five detection and three prediction algorithms previously evaluated in public health settings were calibrated and then evaluated over 3 years. When applied on diagnostic data, only detection using the Serfling regression method and prediction using the non-adaptive log-linear regression method showed acceptable performances during winter influenza seasons. For the syndromic data, none of the detection algorithms displayed a satisfactory performance, while non-adaptive log-linear regression was the best performing prediction method. We conclude that evidence was found for that available algorithms for influenza detection and prediction display satisfactory performance when applied on local diagnostic data during winter influenza seasons. When applied on local syndromic data, the evaluated algorithms did not display consistent performance. Further evaluations and research on combination of methods of these types in public health information infrastructures for 'nowcasting' (integrated detection and prediction) of influenza activity are warranted.

Entities:  

Keywords:  Algorithms; epidemiological methods; evaluation research; human influenza; signal detection analysis

Mesh:

Year:  2017        PMID: 28511741      PMCID: PMC9203438          DOI: 10.1017/S0950268817001005

Source DB:  PubMed          Journal:  Epidemiol Infect        ISSN: 0950-2688            Impact factor:   4.434


  36 in total

1.  Bayesian Markov switching models for the early detection of influenza epidemics.

Authors:  Miguel A Martínez-Beneito; David Conesa; Antonio López-Quílez; Aurora López-Maside
Journal:  Stat Med       Date:  2008-09-30       Impact factor: 2.373

2.  Forecasting seasonal outbreaks of influenza.

Authors:  Jeffrey Shaman; Alicia Karspeck
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-26       Impact factor: 11.205

3.  Early detection of influenza like illness through medication sales.

Authors:  Maja Socan; Vanja Erculj; Jaro Lajovic
Journal:  Cent Eur J Public Health       Date:  2012-06       Impact factor: 1.163

Review 4.  Beyond diagnostic accuracy: the clinical utility of diagnostic tests.

Authors:  Patrick M M Bossuyt; Johannes B Reitsma; Kristian Linnet; Karel G M Moons
Journal:  Clin Chem       Date:  2012-12       Impact factor: 8.327

5.  Detecting disease outbreaks in mass gatherings using Internet data.

Authors:  Elad Yom-Tov; Diana Borsa; Ingemar J Cox; Rachel A McKendry
Journal:  J Med Internet Res       Date:  2014-06-18       Impact factor: 5.428

6.  Algorithms for detecting and predicting influenza outbreaks: metanarrative review of prospective evaluations.

Authors:  A Spreco; T Timpka
Journal:  BMJ Open       Date:  2016-05-06       Impact factor: 2.692

7.  Sequential detection of influenza epidemics by the Kolmogorov-Smirnov test.

Authors:  Pau Closas; Ermengol Coma; Leonardo Méndez
Journal:  BMC Med Inform Decis Mak       Date:  2012-10-03       Impact factor: 2.796

8.  Enhancing time-series detection algorithms for automated biosurveillance.

Authors:  Jerome I Tokars; Howard Burkom; Jian Xing; Roseanne English; Steven Bloom; Kenneth Cox; Julie A Pavlin
Journal:  Emerg Infect Dis       Date:  2009-04       Impact factor: 6.883

9.  Syndromic surveillance using veterinary laboratory data: algorithm combination and customization of alerts.

Authors:  Fernanda C Dórea; Beverly J McEwen; W Bruce McNab; Javier Sanchez; Crawford W Revie
Journal:  PLoS One       Date:  2013-12-11       Impact factor: 3.240

10.  Performance of eHealth data sources in local influenza surveillance: a 5-year open cohort study.

Authors:  Toomas Timpka; Armin Spreco; Örjan Dahlström; Olle Eriksson; Elin Gursky; Joakim Ekberg; Eva Blomqvist; Magnus Strömgren; David Karlsson; Henrik Eriksson; James Nyce; Jorma Hinkula; Einar Holm
Journal:  J Med Internet Res       Date:  2014-04-28       Impact factor: 5.428

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  3 in total

1.  Nowcasting (Short-Term Forecasting) of COVID-19 Hospitalizations Using Syndromic Healthcare Data, Sweden, 2020.

Authors:  Armin Spreco; Anna Jöud; Olle Eriksson; Kristian Soltesz; Reidar Källström; Örjan Dahlström; Henrik Eriksson; Joakim Ekberg; Carl-Oscar Jonson; Carl-Johan Fraenkel; Torbjörn Lundh; Philip Gerlee; Fredrik Gustafsson; Toomas Timpka
Journal:  Emerg Infect Dis       Date:  2022-03       Impact factor: 6.883

2.  Integrated Detection and Prediction of Influenza Activity for Real-Time Surveillance: Algorithm Design.

Authors:  Armin Spreco; Olle Eriksson; Örjan Dahlström; Benjamin John Cowling; Toomas Timpka
Journal:  J Med Internet Res       Date:  2017-06-15       Impact factor: 5.428

3.  Comparison of statistical algorithms for daily syndromic surveillance aberration detection.

Authors:  Angela Noufaily; Roger A Morbey; Felipe J Colón-González; Alex J Elliot; Gillian E Smith; Iain R Lake; Noel McCarthy
Journal:  Bioinformatics       Date:  2019-09-01       Impact factor: 6.937

  3 in total

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