Literature DB >> 20627952

Chromatin interaction of TATA-binding protein is dynamically regulated in human cells.

Petra de Graaf1, Florence Mousson, Bart Geverts, Elisabeth Scheer, Laszlo Tora, Adriaan B Houtsmuller, H Th Marc Timmers.   

Abstract

Gene transcription in mammalian cells is a dynamic process involving regulated assembly of transcription complexes on chromatin in which the TATA-binding protein (TBP) plays a central role. Here, we investigate the dynamic behaviour of TBP by a combination of fluorescence recovery after photobleaching (FRAP) and biochemical assays using human cell lines of different origin. The majority of nucleoplasmic TBP and other TFIID subunits associate with chromatin in a highly dynamic manner. TBP dynamics are regulated by the joint action of the SNF2-related BTAF1 protein and the NC2 complex. Strikingly, both BTAF1 and NC2 predominantly affect TBP dissociation rates, leaving the association rate unchanged. Chromatin immunoprecipitation shows that BTAF1 negatively regulates TBP and NC2 binding to active promoters. Our results support a model for a BTAF1-mediated release of TBP-NC2 complexes from chromatin.

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Year:  2010        PMID: 20627952     DOI: 10.1242/jcs.064097

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  31 in total

1.  Minimizing the impact of photoswitching of fluorescent proteins on FRAP analysis.

Authors:  Florian Mueller; Tatsuya Morisaki; Davide Mazza; James G McNally
Journal:  Biophys J       Date:  2012-04-03       Impact factor: 4.033

2.  A dual role of linker histone H1.4 Lys 34 acetylation in transcriptional activation.

Authors:  Kinga Kamieniarz; Annalisa Izzo; Miroslav Dundr; Philipp Tropberger; Luka Ozretic; Jutta Kirfel; Elisabeth Scheer; Philippe Tropel; Jacek R Wisniewski; Laszlo Tora; Stephane Viville; Reinhard Buettner; Robert Schneider
Journal:  Genes Dev       Date:  2012-03-30       Impact factor: 11.361

3.  Nuclear proteins: finding and binding target sites in chromatin.

Authors:  Martin E van Royen; Angelika Zotter; Shehu M Ibrahim; Bart Geverts; Adriaan B Houtsmuller
Journal:  Chromosome Res       Date:  2011-01       Impact factor: 5.239

4.  Evolutionary acquisition of cysteines determines FOXO paralog-specific redox signaling.

Authors:  Marrit Putker; Harmjan R Vos; Kim van Dorenmalen; Hesther de Ruiter; Ana G Duran; Berend Snel; Boudewijn M T Burgering; Michiel Vermeulen; Tobias B Dansen
Journal:  Antioxid Redox Signal       Date:  2015-01-01       Impact factor: 8.401

5.  Subnuclear segregation of genes and core promoter factors in myogenesis.

Authors:  Jie Yao; Richard D Fetter; Ping Hu; Eric Betzig; Robert Tjian
Journal:  Genes Dev       Date:  2011-02-28       Impact factor: 11.361

Review 6.  Swi2/Snf2 remodelers: hybrid views on hybrid molecular machines.

Authors:  Karl-Peter Hopfner; Christian-Benedikt Gerhold; Kristina Lakomek; Petra Wollmann
Journal:  Curr Opin Struct Biol       Date:  2012-03-23       Impact factor: 6.809

7.  Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP.

Authors:  Petra Wollmann; Sheng Cui; Ramya Viswanathan; Otto Berninghausen; Melissa N Wells; Manuela Moldt; Gregor Witte; Agata Butryn; Petra Wendler; Roland Beckmann; David T Auble; Karl-Peter Hopfner
Journal:  Nature       Date:  2011-07-06       Impact factor: 49.962

Review 8.  One small step for Mot1; one giant leap for other Swi2/Snf2 enzymes?

Authors:  Ramya Viswanathan; David T Auble
Journal:  Biochim Biophys Acta       Date:  2011-05-30

9.  Two-step mechanism for modifier of transcription 1 (Mot1) enzyme-catalyzed displacement of TATA-binding protein (TBP) from DNA.

Authors:  Georgette Moyle-Heyrman; Ramya Viswanathan; Jonathan Widom; David T Auble
Journal:  J Biol Chem       Date:  2012-02-01       Impact factor: 5.157

10.  Conformational changes and catalytic inefficiency associated with Mot1-mediated TBP-DNA dissociation.

Authors:  Gregor Heiss; Evelyn Ploetz; Lena Voith von Voithenberg; Ramya Viswanathan; Samson Glaser; Peter Schluesche; Sushi Madhira; Michael Meisterernst; David T Auble; Don C Lamb
Journal:  Nucleic Acids Res       Date:  2019-04-08       Impact factor: 16.971

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